Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2282 116 4e-21 seq2450 105 7e-18 >seq2282 Length=5406 Score = 116 bits (128), Expect = 4e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 ||||| || || || | | || |||||||| |||||||| ||| | ||| || Sbjct 179 CGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCA 238 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 |||||||| || || || | |||| | || |||||||| || || |||||||| ||| Sbjct 239 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTG 298 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || |||||| ||||| | || | |||||||| ||||| ||||| | || | Sbjct 299 TCTTGGATTTTCTGTTTCACGGCTTGGATGGTGTCGGAGGACTCGACCTCAAGGGTAATT 358 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 || || || |||| |||||||||||| |||||||||| Sbjct 359 GTCTTTCCCGTCAAAGTTTTTACAAAGATCTGCATGG 395 >seq2450 Length=27238 Score = 105 bits (116), Expect = 7e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||| ||| | ||| || ||||||||| || || || | Sbjct 7405 GATTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCG 7346 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | || |||||||| || || |||||||| ||||| |||||||| || | Sbjct 7345 AAGATCAATCGTTGTTGGTCAGGGGGAATACCTTCCTTGTCTTGAATTTTTTGCTTGACG 7286 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || | |||||| | ||||| ||||| | || | || || || |||| ||||||| Sbjct 7285 GCTTGGATGGTGTCAGAAGACTCGACCTCCAGGGTAATTGTCTTTCCCGTCAAAGTTTTT 7226 Query 138601 ACAAAAATCTGCATGG 138616 || ||||||||||||| Sbjct 7225 ACGAAAATCTGCATGG 7210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496204529600880