Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq6235 150 4e-31 seq2450 150 4e-31 seq5736 141 2e-28 seq1860 136 9e-27 seq1856 132 1e-25 seq7632 109 1e-18 seq1292 109 1e-18 seq8353 95.1 3e-14 seq2904 86.0 1e-11 seq1691 86.0 1e-11 >seq6235 Length=3334 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||| | ||||||||| || |||||||||| |||||| || | | || Sbjct 1196 CGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGGGTG 1137 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| |||||||||||||| || || ||||| || || ||| Sbjct 1136 CGCCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGTTGTTGGTCAGGGGGGATACCT 1077 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || ||||||||||||||||| | || || |||||| | | ||| || || | Sbjct 1076 TCCTTGTCTTGAATCTTTTGCTTCACAGCTTGGATGGTGTCGGAGGATTCGACTTCGAGA 1017 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||| ||||| || || ||||| || || Sbjct 1016 GTGATAGTCTTACCGGTGAGGGTCTTGACAAAGATCTG 979 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||| | ||||||||| || ||||| |||| |||||| |||| | || Sbjct 968 CGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGGGTG 909 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| | || || ||||| ||| || ||| Sbjct 908 CGACCGTCCTCGAGCTGCTTCCCGGCGAAGATCAATCGTTGTTGGTCAGGAGGGATACCT 849 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || |||||||||||||| | || || |||||| | | || || || | Sbjct 848 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTGGATGGTGTCGGAAGACTCGACCTCGAGA 789 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || ||||| ||||| || || Sbjct 788 GTGATGGTCTTGCCAGTCAGGGTTTTGACAAAGATCTG 751 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | ||||||||| || ||||| |||| |||||| || | | ||| Sbjct 1424 CGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTG 1365 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || ||||||||||| |||||||| | || || ||||| || || ||| Sbjct 1364 CGACCGTCCTCAAGCTGCTTTCCCGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCT 1305 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || |||||||||||||||| || || |||||| | | || || || | Sbjct 1304 TCCTTGTCTTGGATCTTTTGCTTCACGGCTTGGATGGTGTCGGAGGACTCGACCTCAAGG 1245 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| ||||| | |||||| || || || || Sbjct 1244 GTAATCGTCTTTCCCGTCAAAGTTTTTACGAAGATCTG 1207 Score = 109 bits (120), Expect = 1e-18 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| || |||||||| || |||||||| | || || ||||| ||| |||||||| Sbjct 1589 CCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGAGGGATTCCTTCC 1530 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || ||||||||||||||||| | || || ||| || | | || || || | || Sbjct 1529 TTGTCTTGAATCTTTTGCTTCACAGCTTGGATGGTATCGGAGGACTCGACTTCGAGAGTA 1470 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| ||||| | ||||||||| |||||||| Sbjct 1469 ATCGTCTTTCCCGTCAAAGTTTTCACGAAAATTTG 1435 >seq2450 Length=27238 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | |||||||||||| |||||||||| |||||| || | | ||| Sbjct 7888 CGAAGACGGAGGACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAATCGGAAAGAGTG 7829 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| | || || ||||| ||| || ||| Sbjct 7828 CGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGAGGGATACCT 7769 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| |||| || || |||||| | | || || || | Sbjct 7768 TCCTTGTCTTGAATCTTTTGCTTGACGGCTTGGATGGTGTCAGAAGACTCGACCTCAAGG 7709 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| ||||| | ||||||||| |||||||| Sbjct 7708 GTAATAGTCTTTCCCGTCAAAGTTTTCACGAAAATTTG 7671 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||| | ||||||||| |||||||| |||| |||||| || | | ||| Sbjct 8888 CGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTG 8829 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| | || || ||||| || || ||| Sbjct 8828 CGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCT 8769 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| || ||||||| || || |||||| | | || || || | Sbjct 8768 TCCTTGTCTTGAATCTTCTGTTTCACGGCTTGGATGGTGTCGGAAGACTCGACTTCGAGA 8709 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || || |||||||| Sbjct 8708 GTGATAGTCTTCCCGGTGAGGGTCTTGACGAAAATTTG 8671 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | ||||||||| || |||||||||| |||||| || | | || Sbjct 7660 CGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGGGTG 7601 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||||||||||||||| | || || ||||| || || ||| Sbjct 7600 CGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCT 7541 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || || || || ||||||| || || |||||| | | || || || | Sbjct 7540 TCCTTGTCTTGGATTTTCTGTTTCACGGCTTGGATGGTGTCGGAGGACTCGACCTCAAGG 7481 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| ||||| | |||||| || |||||||| Sbjct 7480 GTAATAGTCTTTCCCGTCAAAGTTTTTACGAAAATTTG 7443 >seq5736 Length=2708 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||| | ||||||||| |||||||| |||| |||||| || | | ||| Sbjct 2454 CGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTG 2395 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||||||||||||||| | || || ||||| || ||| ||| Sbjct 2394 CGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGAATACCT 2335 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || || || |||||||||| || || |||||| | | || || || | Sbjct 2334 TCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATGGTGTCGGAGGACTCGACTTCGAGA 2275 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| ||||| || || ||||| Sbjct 2274 GTGATAGTCTTTCCTGTGAGGGTTTTGACGAAGATTTG 2237 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||| | ||||||||| |||||||| |||| |||||| || | | ||| Sbjct 2682 CGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTG 2623 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||||||||||||||| | || || ||||| || || ||| Sbjct 2622 CGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCT 2563 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || || || |||||||||| || || ||| || | | || || || | Sbjct 2562 TCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATGGTATCGGAGGACTCAACTTCGAGA 2503 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || || || || || Sbjct 2502 GTGATAGTCTTCCCGGTGAGGGTCTTGACGAAGATCTG 2465 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 |||||||||||||||||| | || ||||| | ||| | ||||||||||| ||||||| Sbjct 2363 ATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAACATCCAGAAG 2422 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||||||||||| ||| | || ||| | ||||| Sbjct 2423 GAGTCTACTCTCCACTTGGTCTTGCGCCTTCG 2454 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 |||||||||||||||||| | || ||||| | ||| | ||||||||||| ||||||| Sbjct 2591 ATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAACATCCAGAAG 2650 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||||||||||| ||| | || ||| | ||||| Sbjct 2651 GAGTCTACTCTCCACTTGGTCTTGCGCCTTCG 2682 >seq1860 Length=4765 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||| | ||||||||| || ||||| |||| |||||| || | | ||| Sbjct 1965 CGAAGGCGCAAGACTAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTC 2024 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||||| ||||||||||||||||| | || || ||||| ||| || ||| Sbjct 2025 CGGCCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGAGGGATCCCT 2084 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || ||||||||||||||||| | || || |||||| | | || || || | Sbjct 2085 TCCTTGTCTTGAATCTTTTGCTTCACAGCTTGGATGGTGTCGGAGGACTCGACCTCAAGG 2144 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| ||||| | ||||||||| || || || Sbjct 2145 GTAATAGTCTTTCCCGTCAAAGTTTTCACGAAGATCTG 2182 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||||||||||||||| |||||||| || |||| | ||||||||||| ||||||| Sbjct 2056 ATCTTCGCCGGAAAGCAATTGGAAGACGGCCGGACCCTTTCCGATTACAACATCCAGAAG 1997 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || |||||||| ||| | || ||| | ||||| Sbjct 1996 GAATCTACTCTCCACTTAGTCTTGCGCCTTCG 1965 >seq1856 Length=6291 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||| | ||||||||| || ||||| |||| |||||| || | | || Sbjct 6192 CGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTG 6133 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||||| |||||||||||||||||||| || || ||||| || ||| ||| Sbjct 6132 CGGCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGTTGTTGGTCGGGGGGAATACCT 6073 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || || || |||||||| | || || ||| || | | || || || | Sbjct 6072 TCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAAGACTCGACTTCGAGA 6013 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||| ||||| ||||| || || ||||| Sbjct 6012 GTGATAGTCTTACCGGTGAGGGTTTTGACGAAGATTTG 5975 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || ||||||||||||||||| |||||||| || | || | ||||||||||| ||||| Sbjct 6098 CTCATCTTCGCCGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGATTACAACATCCAG 6157 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || || |||||||| ||| | || ||| | ||||| Sbjct 6158 AAGGAATCTACTCTCCACTTGGTCTTGCGCCTTCG 6192 >seq7632 Length=1044 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||| | ||| ||||| || ||||| |||| |||||| || | | ||| Sbjct 678 CGAAGGCGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTG 737 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||||| ||||||||||||||||| | || || ||||| || || || Sbjct 738 CGACCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCC 797 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || || || |||||||||| || || ||||| | | || || || | Sbjct 798 TCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATAGTGTCAGAAGACTCGACCTCAAGG 857 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| ||||| | ||||||||| || || || Sbjct 858 GTAATTGTCTTTCCCGTCAAAGTTTTCACGAAGATCTG 895 Score = 95.1 bits (104), Expect = 3e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||||||||||||||| |||||||| || | ||| | ||||||||||| ||||||| Sbjct 769 ATCTTCGCCGGAAAGCAATTGGAAGACGGTCGCACTCTTTCCGATTACAACATCCAGAAG 710 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || |||||||||||| | || ||| | ||||| Sbjct 709 GAATCTACTCTTCACTTGGTCTTGCGCCTTCG 678 >seq1292 Length=4421 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||| | ||| ||||| || ||||| |||| |||||| || | | ||| Sbjct 277 CGAAGGCGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTG 218 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||||| ||||||||||||||||| | || || ||||| || || || Sbjct 217 CGACCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCC 158 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || || || |||||||||| || || |||||| | | || || || | Sbjct 157 TCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATGGTGTCAGAAGACTCGACCTCAAGG 98 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| ||||| | |||||| || || || || Sbjct 97 GTAATTGTCTTTCCCGTCAAAGTTTTTACGAAGATCTG 60 Score = 95.1 bits (104), Expect = 3e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||||||||||||||| |||||||| || | ||| | ||||||||||| ||||||| Sbjct 186 ATCTTCGCCGGAAAGCAATTGGAAGACGGTCGCACTCTTTCCGATTACAACATCCAGAAG 245 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || |||||||||||| | || ||| | ||||| Sbjct 246 GAATCTACTCTTCACTTGGTCTTGCGCCTTCG 277 >seq8353 Length=20620 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 |||| | |||||||| ||||| || |||||||| |||| ||||||||||| | ||| | Sbjct 4829 GAAGACGGAGGACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGC 4770 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 || ||||||| |||||| || |||||||| | ||| || ||||| ||| Sbjct 4769 GGCCGTCTTCCAACTGCTTGCCAGCGAAGATCAAACGTTGTTGGTCAGGA 4720 >seq2904 Length=2683 Score = 86.0 bits (94), Expect = 1e-11 Identities = 109/145 (75%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTT-GGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 || ||||| | |||||||| ||| ||||||||||| | | | | |||||||||| || Sbjct 377 TGAAGAGTTG-CTCCTTTTTGGATATTGTAGTCAGCAAGACTATTATCATCTTCCAGTTG 435 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT-CTCGCTCCTGAATCT 199544 ||| || |||||| | |||||| ||||| || ||||||| || | || || || | Sbjct 436 CTTCCCTTTGAAGATCAAACGCTGTTGGTCAGGGGGGATTCCTTGCTTG-TCTTGGATTT 494 Query 199545 TTTGCTTCACGGATTCGACGGTGTC 199569 |||||||||| ||||| |||||| Sbjct 495 TTTGCTTCACTTCTTCGATGGTGTC 519 >seq1691 Length=31176 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 |||| | ||||||||||| || || |||||||| |||| |||||| || | | ||| | Sbjct 15920 GAAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGC 15979 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 || ||||| |||||||| || |||||||| | ||||| ||||| ||| Sbjct 15980 GCCCGTCTTCGAGCTGCTTACCAGCGAAGATCAAGCGCTGTTGGTCAGGA 16029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178780686080043