Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq6235 120 3e-22 seq1860 120 3e-22 seq5736 116 4e-21 seq2450 116 4e-21 seq2282 111 2e-19 seq7632 96.9 4e-15 seq1856 93.3 5e-14 seq1691 91.5 2e-13 seq147 89.7 6e-13 >seq6235 Length=3334 Score = 120 bits (132), Expect = 3e-22 Identities = 158/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | ||| ||||| ||||| ||||| || || || ||||| || Sbjct 962 CGCAAGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGACCG 903 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||| |||||||| ||||| || || ||||| | || | | |||||| Sbjct 902 TCCTCGAGCTGCTTCCCGGCGAAGATCAATCGTTGTTGGTCAGGAGGGATACCTTCCTTG 843 Query 46499 TCCATGATCTTCTTCTT--GAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 || |||||| | ||| ||| | | | |||||| || || || || | |||| Sbjct 842 TCTTGGATCTTTTGCTTCACAGCTTGG--ATGGTGTCGGAAGACTCGACCTCGAGAGTGA 785 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||| ||||| ||||| |||||||| ||||| Sbjct 784 TGGTCTTGCCAGTCAGGGTTTTGACAAAGATCTGCAT 748 Score = 111 bits (122), Expect = 2e-19 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | ||| ||||||||||| ||||| ||||| || |||||| | Sbjct 1190 CGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGCCCA 1131 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | ||| || ||||| | || | | |||||| Sbjct 1130 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGTTGTTGGTCAGGGGGGATACCTTCCTTG 1071 Query 46499 TCCATGATCTTCTTCTT--GAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 || ||||| | ||| ||| | | | |||||| ||||| || || | |||| Sbjct 1070 TCTTGAATCTTTTGCTTCACAGCTTGG--ATGGTGTCGGAGGATTCGACTTCGAGAGTGA 1013 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || || || || || |||||||| ||||| Sbjct 1012 TAGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCAT 976 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | |||||| |||| || | ||| ||||||||||| ||||| ||||| Sbjct 1813 CCTCCACGAAGACGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAA 1754 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCG 46470 |||||||| | || |||||||||||||| ||||| ||||| || Sbjct 1753 AGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCG 1710 >seq1860 Length=4765 Score = 120 bits (132), Expect = 3e-22 Identities = 146/197 (74%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||| ||||| |||||||| | || |||||||||||||| ||||| Sbjct 2451 TCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAG 2510 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTT--GAGCG 46520 ||||| || || ||||| | || | || |||||||| ||| |||| ||| ||| Sbjct 2511 ATCAATCGTTGTTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCT 2570 Query 46521 TCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| || || || || | || ||||| || ||||||| ||||| | Sbjct 2571 TGG--ATGGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCA 2628 Query 46581 CAAAGATTTGCATTTTG 46597 | ||||||||||| ||| Sbjct 2629 CGAAGATTTGCATGTTG 2645 Score = 113 bits (124), Expect = 5e-20 Identities = 142/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||| ||||| |||||||| | || |||||||||||||| ||||| Sbjct 1767 TCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAG 1826 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTT--GAGCG 46520 ||||| || || ||||| | || | || |||||||| ||| |||| ||| ||| Sbjct 1827 ATCAATCGTTGTTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCT 1886 Query 46521 TCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| || || || || | || ||||| || ||||||| ||||| | Sbjct 1887 TGG--ATGGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCA 1944 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 1945 CGAAGATCTGCAT 1957 Score = 113 bits (124), Expect = 5e-20 Identities = 142/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||| ||||| |||||||| | || |||||||||||||| ||||| Sbjct 2223 TCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAG 2282 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTT--GAGCG 46520 ||||| || || ||||| | || | || |||||||| ||| |||| ||| ||| Sbjct 2283 ATCAATCGTTGTTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCT 2342 Query 46521 TCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| || || || || | || ||||| || ||||||| ||||| | Sbjct 2343 TGG--ATGGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCA 2400 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 2401 CGAAGATCTGCAT 2413 Score = 111 bits (122), Expect = 2e-19 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | ||| ||||||||||| ||||| ||||| |||||||| | Sbjct 1515 CGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCA 1574 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||| ||||| ||||| || || ||||| | || | || |||||| Sbjct 1575 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCTTCCTTG 1634 Query 46499 TCCATGATCTTCTTCTT--GAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 || ||| |||| ||| ||| | | | || ||| || || || || | || | Sbjct 1635 TCTTGGATTTTCTGCTTCACAGCTTGG--ATGGTATCGGAGGACTCGACCTCAAGGGTAA 1692 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || ||||||| ||||| || ||||| ||||| Sbjct 1693 TAGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 1729 >seq5736 Length=2708 Score = 116 bits (128), Expect = 4e-21 Identities = 157/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | ||| |||||| ||||| ||||| ||||| |||||||| | Sbjct 2448 CGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCA 2389 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||| |||||||| ||||| || || ||||| | || | | |||||| Sbjct 2388 TCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGAATACCTTCCTTG 2329 Query 46499 TCCATGATCTTCTTCTTGA--GCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 || ||| |||| ||| | || | | | |||||| || || || || | |||| Sbjct 2328 TCTTGGATTTTCTGCTTCACGGCTTGG--ATGGTGTCGGAGGACTCGACTTCGAGAGTGA 2271 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || || || ||||| || ||||||||||| Sbjct 2270 TAGTCTTTCCTGTGAGGGTTTTGACGAAGATTTGCAT 2234 Score = 102 bits (112), Expect = 9e-17 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | ||| |||||| ||||| ||||| ||||| |||||||| | Sbjct 2676 CGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCA 2617 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||| |||||||| ||||| || || ||||| | || | | |||||| Sbjct 2616 TCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTG 2557 Query 46499 TCCATGATCTTCTTCTTGA--GCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 || ||| |||| ||| | || | | | || ||| || || || || | |||| Sbjct 2556 TCTTGGATTTTCTGCTTCACGGCTTGG--ATGGTATCGGAGGACTCAACTTCGAGAGTGA 2499 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || || || || || || ||||| ||||| Sbjct 2498 TAGTCTTCCCGGTGAGGGTCTTGACGAAGATCTGCAT 2462 >seq2450 Length=27238 Score = 116 bits (128), Expect = 4e-21 Identities = 169/237 (71%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||||| ||||| | | ||||| |||| || | ||| ||||| ||||| |||| Sbjct 9586 ATTATTGTCCTCCACGAAGGCGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGT 9527 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 | ||||| |||||||| |||| |||||||||||||| ||||| ||||| || || |||| Sbjct 9526 AATCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGT 9467 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTT--GAGCGTCGCCACCGTGTCGCT 46536 | | || | | |||||||| ||| |||| ||| ||| | | | || ||| Sbjct 9466 CAGGGGGGATACCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGG--ATGGTATCGGA 9409 Query 46537 CGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || | ||||| || || || || |||||||| || ||||| ||||| Sbjct 9408 GGACTCGACTTCGAGAGTGATAGTCTTACCGGTGAGCGTTTTGACGAAGATCTGCAT 9352 Score = 111 bits (122), Expect = 2e-19 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | ||| |||||| ||||| ||||| ||||| |||||||| || Sbjct 8882 CGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCG 8823 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| ||||| || || ||||| | || | | |||||| Sbjct 8822 TCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTG 8763 Query 46499 TCCATGATCTTCTTCTTGA--GCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 || ||||||| || | || | | | |||||| || || || || | |||| Sbjct 8762 TCTTGAATCTTCTGTTTCACGGCTTGG--ATGGTGTCGGAAGACTCGACTTCGAGAGTGA 8705 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || || || || || || || |||||||| Sbjct 8704 TAGTCTTCCCGGTGAGGGTCTTGACGAAAATTTGCAT 8668 Score = 111 bits (122), Expect = 2e-19 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | ||| |||||| ||||| ||||| ||||| |||||||| || Sbjct 9110 CGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCG 9051 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||| ||||| ||||| || || ||||| | || | | |||||| Sbjct 9050 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGAATACCTTCCTTG 8991 Query 46499 TCCATGATCTTCTTCTTGA--GCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 || || || | ||||| || | | | |||||| || || || || | || | Sbjct 8990 TCTTGAATTTTTTGCTTGACGGCTTGG--ATGGTGTCGGAGGACTCGACCTCAAGGGTAA 8933 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || ||||||| ||||| || ||||| ||||| Sbjct 8932 TTGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 8896 Score = 109 bits (120), Expect = 6e-19 Identities = 141/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||| ||||| |||||||| |||| || ||||||||||||||||| Sbjct 7858 TCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAG 7799 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GCG 46520 ||||| || || ||||| | || | | |||||||| ||||| | ||||| || Sbjct 7798 ATCAATCGTTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTTTGCTTGACGGCT 7739 Query 46521 TCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || || || || | || || || || ||||||| ||||| | Sbjct 7738 TGG--ATGGTGTCAGAAGACTCGACCTCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTCA 7681 Query 46581 CAAAGATTTGCAT 46593 | || |||||||| Sbjct 7680 CGAAAATTTGCAT 7668 Score = 102 bits (112), Expect = 9e-17 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | ||| |||||| ||||| ||||| ||||| |||||||| || Sbjct 9338 CGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCG 9279 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||| ||||| ||||| || || ||||| | || | | |||||| Sbjct 9278 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTG 9219 Query 46499 TCCATGATCTTCTTCTTGA--GCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 || ||||||| || | || | | | || ||| || || || || | |||| Sbjct 9218 TCTTGAATCTTCTGTTTCACGGCTTGG--ATGGTATCGGAGGACTCAACTTCGAGAGTGA 9161 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || || || || || || ||||| ||||| Sbjct 9160 TAGTCTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 9124 Score = 100 bits (110), Expect = 3e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||| ||||| |||||||| |||| |||||||||||||| ||||| Sbjct 7402 TCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAG 7343 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GCG 46520 ||||| || || ||||| | || | | |||||||| || || | ||||| || Sbjct 7342 ATCAATCGTTGTTGGTCAGGGGGAATACCTTCCTTGTCTTGAATTTTTTGCTTGACGGCT 7283 Query 46521 TCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || || || |||| || || || || ||||||| ||||| | Sbjct 7282 TGG--ATGGTGTCAGAAGACTCGACCTCCAGGGTAATTGTCTTTCCCGTCAAAGTTTTTA 7225 Query 46581 CAAAGATTTGCAT 46593 | || || ||||| Sbjct 7224 CGAAAATCTGCAT 7212 Score = 100 bits (110), Expect = 3e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||| ||||| || ||||| | || ||||||||||| |||||||| Sbjct 7630 TCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAG 7571 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GCG 46520 ||||| || || ||||| | || | | |||||||| ||| |||| || | || Sbjct 7570 ATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTGGATTTTCTGTTTCACGGCT 7511 Query 46521 TCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | || || || || ||||||| ||||| | Sbjct 7510 TGG--ATGGTGTCGGAGGACTCGACCTCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTTA 7453 Query 46581 CAAAGATTTGCAT 46593 | || |||||||| Sbjct 7452 CGAAAATTTGCAT 7440 >seq2282 Length=5406 Score = 111 bits (122), Expect = 2e-19 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | ||| ||||||||||| ||||| ||||| |||||||| | Sbjct 179 CGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCA 238 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||| ||||| ||||| || || ||||| | || | | |||||| Sbjct 239 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTG 298 Query 46499 TCCATGATCTTCTTCTTGA--GCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 || ||| |||| || | || | | | |||||| || || || || | || | Sbjct 299 TCTTGGATTTTCTGTTTCACGGCTTGG--ATGGTGTCGGAGGACTCGACCTCAAGGGTAA 356 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || ||||||| ||||| |||||||| ||||| Sbjct 357 TTGTCTTTCCCGTCAAAGTTTTTACAAAGATCTGCAT 393 Score = 84.2 bits (92), Expect = 2e-11 Identities = 120/167 (72%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 46429 AGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCAC 46488 |||||| |||| |||||||||||||||||||| ||||| || || ||||| | || | Sbjct 1 AGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGAT 60 Query 46489 GCTCTCCTTGTCCATGATCTTCTTCTT--GAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | |||||||| ||| |||| || ||| | | | |||||| || || || Sbjct 61 ACCTTCCTTGTCTTGGATTTTCTGTTTCACAGCTTGG--ATGGTGTCGGAAGACTCGACT 118 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| || || ||||||| ||||| || ||||| ||||| Sbjct 119 TCGAGAGTGATCGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 165 >seq7632 Length=1044 Score = 96.9 bits (106), Expect = 4e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | ||| |||||| ||||| ||||| ||||| |||||||| || Sbjct 912 CGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCG 971 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 || |||||||||||||||||||| ||||| || || ||||| Sbjct 972 TCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTC 1012 >seq1856 Length=6291 Score = 93.3 bits (102), Expect = 5e-14 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | ||| ||||| ||||| ||||| ||||| || ||||| || Sbjct 6186 CGCAAGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCG 6127 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || | ||||| |||||||| || | ||| || ||||||| || | | |||||| Sbjct 6126 TCTTCCAATTGCTTTCCGGCGAAGATGAGGCGTTGTTGGTCGGGGGGAATACCTTCCTTG 6067 Query 46499 TCCATGATCTTCTTCTTGA--GCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 || ||| |||| ||| | || | | | || ||| || || || || | |||| Sbjct 6066 TCTTGGATTTTCTGCTTCACAGCTTGG--ATGGTATCGGAAGACTCGACTTCGAGAGTGA 6009 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || || || ||||| || ||||||||||| Sbjct 6008 TAGTCTTACCGGTGAGGGTTTTGACGAAGATTTGCAT 5972 >seq1691 Length=31176 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || ||||||||| |||| ||||||||||| || ||||| Sbjct 15948 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGCCCGTCTTCGAGCTGCTTACCAGCGAA 16007 Query 46462 TATCAAGCGCTGCTGGTC 46479 ||||||||||| ||||| Sbjct 16008 GATCAAGCGCTGTTGGTC 16025 >seq147 Length=786 Score = 89.7 bits (98), Expect = 6e-13 Identities = 132/185 (71%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 46411 GATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCG 46470 ||| ||||| ||||| |||||||| |||| |||||||||||||| ||||| ||||| || Sbjct 2 GATGTTGTAATCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCG 61 Query 46471 CTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GCGTCGCCACC 46528 || ||||| | || | | |||||||| ||||||| || | || | | | Sbjct 62 TTGTTGGTCAGGGGGAATACCTTCCTTGTCTTGAATCTTCTGTTTCACGGCTTGG--ATG 119 Query 46529 GTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATT 46588 |||||| || || || || | ||||| || || || || || || || || || ||| Sbjct 120 GTGTCGGAAGACTCGACTTCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAAATT 179 Query 46589 TGCAT 46593 ||||| Sbjct 180 TGCAT 184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565172486137080