Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2450 120 2e-21 seq6235 114 8e-20 seq147 111 1e-18 seq1840 109 4e-18 seq5736 107 1e-17 seq1860 107 1e-17 seq1856 107 1e-17 seq247 107 1e-17 seq1953 89.7 3e-12 >seq2450 Length=27238 Score = 120 bits (132), Expect = 2e-21 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || || || ||| || | || ||||| | ||||| Sbjct 7889 ACGAAGACGGAGGACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAATCGGAAAGAGT 7830 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | || ||||| ||||| || || || || | |||||||| |||||||| || || Sbjct 7829 GCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGAGGGATACC 7770 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||||||||||||||| ||||| |||| || || |||| | | | |||| Sbjct 7769 TTCCTTGTCTTGAATCTTTTGCTTGACGGCTTGGATGGTGTCAGAAGACTCGA-CCTCAA 7711 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||||| || || || | ||| || ||||||||||| Sbjct 7710 GGGTAATAGTCTTTCCCGTCAAAGTTTTCACGAAAATTTG 7671 Score = 113 bits (124), Expect = 3e-19 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || || ||||| ||||| || || | |||||||| ||||| || || ||||||||| Sbjct 9278 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTG 9219 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 ||||||||||| ||||| || |||| || ||||| | | | ||| || || ||| Sbjct 9218 TCTTGAATCTTCTGTTTCACGGCTTGGATGGTATCGGAGGACTCAACTTCGAGAGTGATA 9159 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||||||||| ||||| ||||| || || Sbjct 9158 GTCTTACCGGTGAGGGTCTTGACGAAGATCTG 9127 Score = 105 bits (116), Expect = 4e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || || ||| ||| || | || ||||| | ||||| Sbjct 7433 ACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGT 7374 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | || || || ||||| ||||| || || | |||||||| ||||| ||||| || Sbjct 7373 GCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGAATACC 7314 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||||||||| ||||| ||||| |||| || || |||| | | | || | Sbjct 7313 TTCCTTGTCTTGAATTTTTTGCTTGACGGCTTGGATGGTGTCAGAAGACTCGA-CCTCCA 7255 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||| || || || || | ||| || |||||||| || Sbjct 7254 GGGTAATTGTCTTTCCCGTCAAAGTTTTTACGAAAATCTG 7215 Score = 102 bits (112), Expect = 5e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || || ||| ||| || | || ||||| | || || Sbjct 7661 ACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGGGT 7602 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || || |||||||| || || || | |||||||| ||||| || || || Sbjct 7601 GCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACC 7542 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| || || ||||| || |||| || || || | | ||||| Sbjct 7541 TTCCTTGTCTTGGATTTTCTGTTTCACGGCTTGGATGGTGTCGGAGGACTCGACCTCAAG 7482 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||||| || || || | ||| || ||||||||||| Sbjct 7481 GGTAATAGTCTTTCCCGTCAAAGTTTTTACGAAAATTTG 7443 Score = 102 bits (112), Expect = 5e-16 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || || ||||| || || || || | |||||||| ||||| || || ||||||||| Sbjct 8822 TCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTG 8763 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 ||||||||||| ||||| || |||| || || || | | | | ||| || || || Sbjct 8762 TCTTGAATCTTCTGTTTCACGGCTTGGATGGTGTCGGAAGACTCGA-CTTCGAGAGTGAT 8704 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || |||||||| ||||| ||||||||||| Sbjct 8703 AGTCTTCCCGGTGAGGGTCTTGACGAAAATTTG 8671 Score = 95.1 bits (104), Expect = 8e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || || ||||| ||||| || || | |||||||| ||||| ||||| ||||||||| Sbjct 9050 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGAATACCTTCCTTG 8991 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 |||||||| ||||| ||||| |||| || || || | | ||||||||||| Sbjct 8990 TCTTGAATTTTTTGCTTGACGGCTTGGATGGTGTCGGAGGACTCGACCTCAAGGGTAATT 8931 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || | ||| || ||||| || || Sbjct 8930 GTCTTTCCCGTCAAAGTTTTCACGAAGATCTG 8899 Score = 95.1 bits (104), Expect = 8e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || || ||||| ||||| || || | |||||||| ||||| || || ||||||||| Sbjct 9506 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTG 9447 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 ||||| || || || || ||||||| || ||||| | | ||| || || ||| Sbjct 9446 TCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTCGACTTCGAGAGTGATA 9387 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||||||||| || || ||||| || || Sbjct 9386 GTCTTACCGGTGAGCGTTTTGACGAAGATCTG 9355 >seq6235 Length=3334 Score = 114 bits (126), Expect = 8e-20 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || || ||||| ||||| || || | |||||||| |||||||| ||||||||||| Sbjct 1587 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGAGGGATTCCTTCCTT 1528 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||||||||||||||| || ||||||| || ||||| | | ||| || ||||| Sbjct 1527 GTCTTGAATCTTTTGCTTCACAGCTTGGATGGTATCGGAGGACTCGACTTCGAGAGTAAT 1468 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || | ||| || ||||||||||| Sbjct 1467 CGTCTTTCCCGTCAAAGTTTTCACGAAAATTTG 1435 Score = 109 bits (120), Expect = 4e-18 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || || ||||| || || || || || |||||||| ||||| || || |||||||| Sbjct 1131 ATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGTTGTTGGTCAGGGGGGATACCTTCCTT 1072 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||||||||||||||| || ||||||| || || || | | | ||| || || || Sbjct 1071 GTCTTGAATCTTTTGCTTCACAGCTTGGATGGTGTCGGAGGATTCGACTTCGAGAGTGAT 1012 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| ||||||||||| ||||| || || || || Sbjct 1011 AGTCTTACCGGTGAGGGTCTTGACAAAGATCTG 979 Score = 98.7 bits (108), Expect = 6e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || || ||| ||| || | || ||||| | ||||| Sbjct 1425 ACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGT 1366 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | || ||||| |||||||| || || || | |||||||| ||||| || || || Sbjct 1365 GCGACCGTCCTCAAGCTGCTTTCCCGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACC 1306 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| |||||||| || || |||| || || || | | ||||| Sbjct 1305 TTCCTTGTCTTGGATCTTTTGCTTCACGGCTTGGATGGTGTCGGAGGACTCGACCTCAAG 1246 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || || || || | ||| || ||||| || || Sbjct 1245 GGTAATCGTCTTTCCCGTCAAAGTTTTTACGAAGATCTG 1207 >seq147 Length=786 Score = 111 bits (122), Expect = 1e-18 Identities = 118/153 (77%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || || ||||| ||||| || || | |||||||| ||||| ||||| ||||||||| Sbjct 30 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGAATACCTTCCTTG 89 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 ||||||||||| ||||| || |||| || || || | | | | ||| || || || Sbjct 90 TCTTGAATCTTCTGTTTCACGGCTTGGATGGTGTCGGAAGACTCGA-CTTCGAGAGTGAT 148 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || |||||||| ||||| ||||||||||| Sbjct 149 AGTCTTCCCGGTGAGGGTCTTGACGAAAATTTG 181 >seq1840 Length=25476 Score = 109 bits (120), Expect = 4e-18 Identities = 387/595 (65%), Gaps = 16/595 (3%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 ||||||||||| || || || || ||| ||||| | |||||||| | | || Sbjct 25159 ATTGGTATTGACTTGGGTACCACCTACTCCTGTGTCGGCTACTGGCAAAACGATCGTGTG 25100 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || ||||| || ||||||||||| | || || || || ||||| |||| || || Sbjct 25099 GAGATCATTGCGAACGACCAAGGTAACCGCACCACCCCTTCTTATGTCGCTTTCACCGAC 25040 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | | | || |||||||| || || |||| | || || || || || Sbjct 25039 ACCGAGCGTTTGATCGGAGATGCCGCCAAGAATCAGGTCGCCATGAACCCCTACAACACC 24980 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | || ||||| || | |||||||||||| |||| |||| || |||| ||||| || Sbjct 24979 CTGTTCGATGCCAAGCGTTTGATTGGTCGTCATTTCAATGAGGCCGCTGTGCAATCCGAC 24920 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGG---TGGTAAACCATATATAGAAG-- 474626 ||| || ||||| || ||||| || ||| ||| ||| || | ||| Sbjct 24919 ATGAAGCACTGGCCCTTCAAGGTTATCGATGGTGGCTCCTCTAAGCCCATCCTCCAAGTC 24860 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 | |||| | || |||| || || || || || || | ||||| ||| | || | Sbjct 24859 GAGTACAAG--GGAGAAAAGAAGACCTTCTCCCCCGAGGAAGTCTCTTCCATGATCTTGG 24802 Query 474687 CCAAAATGAAACAAACCGC-GAGCTCAT-ATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744 || |||| | | || ||| | | ||| || | || | || || || || Sbjct 24801 TGAAGATGAGGGAGATTGCAGAGGCCTTCATC--GGTAAGCCTGTCAAGGAGGCTGTCAT 24744 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 ||||| || || || || || |||||||| | ||||| || || ||||| || | || Sbjct 24743 CACTGTCCCTGCCTACTTCAACGATTCTCAGAGGCAAGCCACCAAGGATGCTGGTATCAT 24684 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| ||| | | || ||||| || || || || || || || || |||| ||||| Sbjct 24683 TGCTGGTTTGACCGTCCGTCGTATCATCAACGAGCCCACTGCCGCTGCCATTGCCTATGG 24624 Query 474865 TCTTGATAAGAATTCTGACAA-AGAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918 | | || ||||| ||||| ||| | || || | ||||| |||| ||||| Sbjct 24623 TTTGGACAAGAA--GGGACAAGAGAGG--AACGTGCTCATCTTCGATTTGGGAGG 24573 >seq5736 Length=2708 Score = 107 bits (118), Expect = 1e-17 Identities = 89/106 (84%), Gaps = 2/106 (2%) Strand=Plus/Minus Query 480608 AGTTCTGTTATCTT-CAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAA 480666 ||||| | ||||| | || ||||||||||| || ||||| |||||||| ||||| || | Sbjct 609 AGTTC-GCTATCTGACTAGCTGCTTTCCAGCGAAGATAAGGCGTTGTTGGTCAGGGGGGA 551 Query 480667 TTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 |||| ||||||||||||||||||||||| || |||| |||||||| Sbjct 550 TTCCCTCCTTGTCTTGAATCTTTTGTTTCACGGCTTGGATAGTATC 505 Score = 96.9 bits (106), Expect = 2e-14 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| | ||||| | ||| || || |||||||| || || || | |||||| Sbjct 2640 TTGTAATCGGAAAGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGT 2581 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||| || || |||||||||||||| || || || || || |||| || ||||| Sbjct 2580 TGGTCAGGGGGGATACCTTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATGGTATCG 2521 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | ||| || || ||||| || |||||||| ||||| ||||| || || Sbjct 2520 GAGGACTCAACTTCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAGATCTG 2465 Score = 87.8 bits (96), Expect = 1e-11 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| | ||||| | ||| || || |||||||| || || || | |||||| Sbjct 2412 TTGTAATCGGAAAGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGT 2353 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||| ||||| |||||||||||||| || || || || || |||| || || || Sbjct 2352 TGGTCAGGGGGAATACCTTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATGGTGTCG 2293 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | ||| || || ||||| || || ||||| || || ||||| ||||| Sbjct 2292 GAGGACTCGACTTCGAGAGTGATAGTCTTTCCTGTGAGGGTTTTGACGAAGATTTG 2237 >seq1860 Length=4765 Score = 107 bits (118), Expect = 1e-17 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| | ||||||||| || || || | |||||||| |||||||| || ||||||||| Sbjct 2031 TCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGAGGGATCCCTTCCTTG 2090 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 |||||||||||||| || ||||||| || || || | | |||||||||||| Sbjct 2091 TCTTGAATCTTTTGCTTCACAGCTTGGATGGTGTCGGAGGACTCGACCTCAAGGGTAATA 2150 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || | ||| || ||||| || || Sbjct 2151 GTCTTTCCCGTCAAAGTTTTCACGAAGATCTG 2182 Score = 102 bits (112), Expect = 5e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || || ||| ||| || | || ||||| | ||||| Sbjct 2420 ACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGT 2479 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || || ||||| ||||| || || | |||||||| ||||| || || || Sbjct 2480 GCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCC 2539 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| || || || || ||||||| || ||||| | | ||||| Sbjct 2540 TTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTCGACCTCAAG 2599 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || || || || | ||| || ||||| ||||| Sbjct 2600 GGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATTTG 2638 Score = 98.7 bits (108), Expect = 6e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || || ||| ||| || | || ||||| | ||||| Sbjct 1736 ACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGT 1795 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || || ||||| ||||| || || | |||||||| ||||| || || || Sbjct 1796 GCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCC 1855 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| || || || || ||||||| || ||||| | | ||||| Sbjct 1856 TTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTCGACCTCAAG 1915 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || || || || | ||| || ||||| || || Sbjct 1916 GGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATCTG 1954 Score = 98.7 bits (108), Expect = 6e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || || ||| ||| || | || ||||| | ||||| Sbjct 2192 ACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGT 2251 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || || ||||| ||||| || || | |||||||| ||||| || || || Sbjct 2252 GCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCC 2311 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| || || || || ||||||| || ||||| | | ||||| Sbjct 2312 TTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTCGACCTCAAG 2371 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || || || || | ||| || ||||| || || Sbjct 2372 GGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATCTG 2410 Score = 93.3 bits (102), Expect = 3e-13 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| | ||||| | ||| || || ||||| ||||| || || | |||||| Sbjct 1551 TTGTAATCGGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGT 1610 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||| || || |||||||||||||| || || || || ||||||| || ||||| Sbjct 1611 TGGTCAGGGGGGATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCG 1670 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | |||||||||||||| || || || | ||| || ||||| || || Sbjct 1671 GAGGACTCGACCTCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTCACGAAGATCTG 1726 >seq1856 Length=6291 Score = 107 bits (118), Expect = 1e-17 Identities = 117/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| | ||||||||| || || || || |||||||| || || ||||| ||||||||| Sbjct 6126 TCTTCCAATTGCTTTCCGGCGAAGATGAGGCGTTGTTGGTCGGGGGGAATACCTTCCTTG 6067 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 ||||| || || || || ||||||| || ||||| | | | | ||| || || || Sbjct 6066 TCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAAGACTCGA-CTTCGAGAGTGAT 6008 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| ||||||||||| || || ||||| ||||| Sbjct 6007 AGTCTTACCGGTGAGGGTTTTGACGAAGATTTG 5975 >seq247 Length=13334 Score = 107 bits (118), Expect = 1e-17 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 ||||| | || ||| || || ||||||||| |||| ||||| | |||||| ||||| | Sbjct 9993 AGAGTGCGGTCATCCTCGAGCTGCTTTCCAACAAAGATAAGGCATTGTTGGTCAGGGGAG 9934 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||| ||||||||||||||||| ||||| ||||||| |||||||| Sbjct 9933 ATTCCCTCCTTGTCTTGAATCTTATGTTTCACAGCTTGGATAGTATC 9887 >seq1953 Length=6420 Score = 89.7 bits (98), Expect = 3e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 480646 GACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAA 480705 || ||||||| ||||| ||||| |||||||||||||| || || || || ||||||| | Sbjct 975 GAAGTTGTTGGTCAGGGGGAATACCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGA 1034 Query 480706 TAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAA 480765 | ||||| | | ||| || || ||||| ||||||||||| || || ||||| | Sbjct 1035 TGGTATCGGAGGACTCGACTTCGAGAGTGATAGTCTTACCGGTGAGGGTTTTGACGAAGA 1094 Query 480766 TTTG 480769 |||| Sbjct 1095 TTTG 1098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267779033925692