Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2332 93.3 5e-14 >seq2332 Length=5771 Score = 93.3 bits (102), Expect = 5e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 13550 ACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAGTGT 13609 || || ||||| ||| ||||||| || ||||| ||||| || || |||| | | || Sbjct 3230 ACTGGGATTCCAAAGCTGGATGATGCCAACAAAGCGGGAACAGCGAGTTCTGCAGAATGC 3171 Query 13610 ACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTC 13669 || || |||||||| ||||| || || || ||||| | || || ||||| || Sbjct 3170 ACACTGATTGTCACCGAGGGAGACTCCGCGAAAACGTTGGCAGTGTGTGGTCTTGGGGTT 3111 Query 13670 GTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAA 13710 ||||| |||||| |||||||||||| || ||||| || || Sbjct 3110 GTTGGGCGTGATTTCTACGGTGTGTTTCCTCTTCGTGGAAA 3070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596500032527520