Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq2450 107 3e-18 seq1860 107 3e-18 seq7632 96.9 6e-15 seq5736 93.3 8e-14 seq2282 93.3 8e-14 seq1292 93.3 8e-14 seq6235 91.5 3e-13 >seq2450 Length=27238 Score = 107 bits (118), Expect = 3e-18 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || || || || | ||||| ||| || || || ||||| Sbjct 9353 ATACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCG 9294 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || |||| || | || || ||||| || || |||| ||||||||||| Sbjct 9293 GAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGG 9234 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTAC--ATTAGTTATAGTATCTGACGATT 172017 || || ||||| || ||||| || || | ||| || || | || ||||| || || | Sbjct 9233 GGGATACCTTCCTTGTCTTGAATCTTCTGTTTCACGGCTTGG--ATGGTATCGGAGGACT 9176 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | ||||| ||||| || || ||||| || | || || | ||| |||||||| Sbjct 9175 CAACTTCGAGAGTGATAGTCTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 9124 Score = 102 bits (112), Expect = 1e-16 Identities = 163/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || || || || | ||||| ||| || || || ||||| Sbjct 9125 ATACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCG 9066 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || |||| || | || || ||||| || || |||| ||||||||||| Sbjct 9065 GAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGG 9006 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTAC--ATTAGTTATAGTATCTGACGATT 172017 || || ||||| || ||||| ||||| | || || || | || || || || || | Sbjct 9005 GGAATACCTTCCTTGTCTTGAATTTTTTGCTTGACGGCTTGG--ATGGTGTCGGAGGACT 8948 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 8947 CGACCTCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 8896 Score = 102 bits (112), Expect = 1e-16 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 || || | ||| || || || || || | ||||| || || || || ||||| || Sbjct 9578 CCTCCACGAAGGCGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCGGAA 9519 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | || || |||| || | || || ||||| || || |||| ||||||||||| || Sbjct 9518 AGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGG 9459 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACA--TTAGTTATAGTATCTGACGATTCTA 172020 || ||||| || ||||| ||||| | || ||| || | || ||||| || || || | Sbjct 9458 ATACCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGG--ATGGTATCGGAGGACTCGA 9401 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||| ||||| || || ||||| || | ||||| | ||| |||||||| Sbjct 9400 CTTCGAGAGTGATAGTCTTACCGGTGAGCGTTTTGACGAAGATCTGCAT 9352 Score = 93.3 bits (102), Expect = 8e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || || || | ||||| || || || || ||||| Sbjct 7441 ATACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCG 7382 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || |||| || | || || ||||| || || |||| ||||||||||| Sbjct 7381 GAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGG 7322 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTAC--ATTAGTTATAGTATCTGACGATT 172017 || || ||||| || ||||| ||||| | || || || | || || || || || | Sbjct 7321 GGAATACCTTCCTTGTCTTGAATTTTTTGCTTGACGGCTTGG--ATGGTGTCAGAAGACT 7264 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 7263 CGACCTCCAGGGTAATTGTCTTTCCCGTCAAAGTTTTTACGAAAATCTGCAT 7212 Score = 89.7 bits (98), Expect = 9e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || || || || | ||||| ||| || || || ||||| Sbjct 8897 ATACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCG 8838 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || |||| || | || || || || || || |||| ||||||||||| Sbjct 8837 GAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGG 8778 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTAC--ATTAGTTATAGTATCTGACGATT 172017 || || ||||| || ||||| || || | ||| || || | || || || || || | Sbjct 8777 GGGATACCTTCCTTGTCTTGAATCTTCTGTTTCACGGCTTGG--ATGGTGTCGGAAGACT 8720 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | ||||| ||||| || || || || || | || || | ||| || ||||| Sbjct 8719 CGACTTCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAAATTTGCAT 8668 >seq1860 Length=4765 Score = 107 bits (118), Expect = 3e-18 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || ||||| || | ||||| || || || || ||||| Sbjct 1956 ATACCACCACGAAGGCGCAAGACTAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCG 2015 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| |||||||| || || || || || |||| ||||||||||| Sbjct 2016 GAAAGGGTCCGGCCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGA 2075 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACA--TTAGTTATAGTATCTGACGATT 172017 || || ||||| || ||||| || || | || ||| || | || || || || || | Sbjct 2076 GGGATCCCTTCCTTGTCTTGAATCTTTTGCTTCACAGCTTGG--ATGGTGTCGGAGGACT 2133 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 2134 CGACCTCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 2185 Score = 102 bits (112), Expect = 1e-16 Identities = 163/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || || || | ||||| || || || || ||||| Sbjct 1728 ATACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCG 1787 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || || | || || ||||| || || |||| ||||||||||| Sbjct 1788 GAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGG 1847 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACA--TTAGTTATAGTATCTGACGATT 172017 || || ||||| || ||||| ||||| | || ||| || | || ||||| || || | Sbjct 1848 GGGATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGG--ATGGTATCGGAGGACT 1905 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || || |||||||| || || || || ||||| | ||| |||||||| Sbjct 1906 CGACCTCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 1957 Score = 102 bits (112), Expect = 1e-16 Identities = 163/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || || || | ||||| || || || || ||||| Sbjct 2184 ATACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCG 2243 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || || | || || ||||| || || |||| ||||||||||| Sbjct 2244 GAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGG 2303 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACA--TTAGTTATAGTATCTGACGATT 172017 || || ||||| || ||||| ||||| | || ||| || | || ||||| || || | Sbjct 2304 GGGATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGG--ATGGTATCGGAGGACT 2361 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || || |||||||| || || || || ||||| | ||| |||||||| Sbjct 2362 CGACCTCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 2413 Score = 100 bits (110), Expect = 5e-16 Identities = 166/238 (70%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || || || | ||||| || || || || ||||| Sbjct 2412 ATACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCG 2471 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || || | || || ||||| || || |||| ||||||||||| Sbjct 2472 GAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGG 2531 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACA--TTAGTTATAGTATCTGACGATT 172017 || || ||||| || ||||| ||||| | || ||| || | || ||||| || || | Sbjct 2532 GGGATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGG--ATGGTATCGGAGGACT 2589 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATT 172075 | || || || |||||||| || || || || ||||| | ||| || ||||| || || Sbjct 2590 CGACCTCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATTTGCATGTTGTT 2647 Score = 96.9 bits (106), Expect = 6e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| | ||| || || || || || | ||||| || || || || ||||| || Sbjct 1503 CCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAA 1562 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | || || | || || | || || ||||| || || |||| ||||||||||| || Sbjct 1563 AGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGG 1622 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACA--TTAGTTATAGTATCTGACGATTCTA 172020 || ||||| || ||||| ||||| | || ||| || | || ||||| || || || | Sbjct 1623 ATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGG--ATGGTATCGGAGGACTCGA 1680 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 1681 CCTCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 1729 >seq7632 Length=1044 Score = 96.9 bits (106), Expect = 6e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 || || | ||| || || || || || | ||||| || || || || ||||| || Sbjct 672 CCTCCACGAAGGCGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCGGAA 731 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | || || |||| |||||||| || || || || || |||| ||||||||||| || Sbjct 732 AGAGTGCGACCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGG 791 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTAC--ATTAGTTATAGTATCTGACGATTCTA 172020 || || || || ||||| ||||| | || || || | ||||| || || || || | Sbjct 792 ATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGG--ATAGTGTCAGAAGACTCGA 849 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 850 CCTCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 898 >seq5736 Length=2708 Score = 93.3 bits (102), Expect = 8e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || || || || | ||||| ||| || || || ||||| Sbjct 2691 ATACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCG 2632 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || || | || || || || || || |||| ||||||||||| Sbjct 2631 GAAAGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGG 2572 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTAC--ATTAGTTATAGTATCTGACGATT 172017 || || ||||| || ||||| ||||| | || || || | || ||||| || || | Sbjct 2571 GGGATACCTTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGG--ATGGTATCGGAGGACT 2514 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | ||||| ||||| || || || || || | || || | ||| |||||||| Sbjct 2513 CAACTTCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAGATCTGCAT 2462 Score = 89.7 bits (98), Expect = 9e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || || || || | ||||| ||| || || || ||||| Sbjct 2463 ATACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCG 2404 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || || | || || || || || || |||| ||||||||||| Sbjct 2403 GAAAGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGG 2344 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTAC--ATTAGTTATAGTATCTGACGATT 172017 || || ||||| || ||||| ||||| | || || || | || || || || || | Sbjct 2343 GGAATACCTTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGG--ATGGTGTCGGAGGACT 2286 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | ||||| ||||| || || || || || | ||||| | ||| || ||||| Sbjct 2285 CGACTTCGAGAGTGATAGTCTTTCCTGTGAGGGTTTTGACGAAGATTTGCAT 2234 >seq2282 Length=5406 Score = 93.3 bits (102), Expect = 8e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || || || || | ||||| || || || || ||||| Sbjct 164 ATACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCG 223 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || || | || || ||||| || || |||| ||||||||||| Sbjct 224 GAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGG 283 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTAC--ATTAGTTATAGTATCTGACGATT 172017 || || ||||| || ||||| ||||| | ||| || || | || || || || || | Sbjct 284 GGGATACCTTCCTTGTCTTGGATTTTCTGTTTCACGGCTTGG--ATGGTGTCGGAGGACT 341 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || || ||||| || || || || || ||||| | || |||||||| Sbjct 342 CGACCTCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTTACAAAGATCTGCAT 393 Score = 87.8 bits (96), Expect = 3e-12 Identities = 116/159 (73%), Gaps = 4/159 (3%) Strand=Plus/Plus Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972 |||| || | || || || || || || |||| ||||||||||| || || ||||| | Sbjct 9 CGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCT 68 Query 171973 TATCTTGTATTTTATTTTTTACA--TTAGTTATAGTATCTGACGATTCTACTTCTAGAGT 172030 | ||||| ||||| | ||| ||| || | || || || || || || ||||| ||||| Sbjct 69 TGTCTTGGATTTTCTGTTTCACAGCTTGG--ATGGTGTCGGAAGACTCGACTTCGAGAGT 126 Query 172031 AATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || || || ||||| | ||| |||||||| Sbjct 127 GATCGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 165 >seq1292 Length=4421 Score = 93.3 bits (102), Expect = 8e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 || || | ||| || || || || || | ||||| || || || || ||||| || Sbjct 283 CCTCCACGAAGGCGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCGGAA 224 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | || || |||| |||||||| || || || || || |||| ||||||||||| || Sbjct 223 AGAGTGCGACCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGG 164 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTAC--ATTAGTTATAGTATCTGACGATTCTA 172020 || || || || ||||| ||||| | || || || | || || || || || || | Sbjct 163 ATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGG--ATGGTGTCAGAAGACTCGA 106 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 105 CCTCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 57 >seq6235 Length=3334 Score = 91.5 bits (100), Expect = 3e-13 Identities = 110/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 || || ||||| || || |||| ||||||||||| || |||||||| || ||||| || Sbjct 1577 TGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGAGGGATTCCTTCCTTGTCTTGAATC 1518 Query 171984 TTATTTTTTACA--TTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTAC 172041 || | || ||| || | || ||||| || || || ||||| |||||||| || || | Sbjct 1517 TTTTGCTTCACAGCTTGG--ATGGTATCGGAGGACTCGACTTCGAGAGTAATCGTCTTTC 1460 Query 172042 CAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || ||||| | ||| || ||||| Sbjct 1459 CCGTCAAAGTTTTCACGAAAATTTGCAT 1432 Score = 89.7 bits (98), Expect = 9e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || || || || | ||||| || || || || ||||| Sbjct 977 ATACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCA 918 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | || || || || || || |||| ||||||||||| Sbjct 917 GAAAGGGTGCGACCGTCCTCGAGCTGCTTCCCGGCGAAGATCAATCGTTGTTGGTCAGGA 858 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACA--TTAGTTATAGTATCTGACGATT 172017 || || ||||| || ||||| || || | || ||| || | || || || || || | Sbjct 857 GGGATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTGG--ATGGTGTCGGAAGACT 800 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || ||||| ||||| || ||||| | ||||| | || |||||||| Sbjct 799 CGACCTCGAGAGTGATGGTCTTGCCAGTCAGGGTTTTGACAAAGATCTGCAT 748 Score = 84.2 bits (92), Expect = 4e-11 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || || || | ||||| || || || || ||||| Sbjct 1433 ATACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCG 1374 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || |||| || | || || || || || || |||| ||||||||||| Sbjct 1373 GAAAGAGTGCGACCGTCCTCAAGCTGCTTTCCCGCGAAGATCAATCGTTGTTGGTCAGGG 1314 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTAC--ATTAGTTATAGTATCTGACGATT 172017 || || ||||| || ||||| || || | || || || | || || || || || | Sbjct 1313 GGGATACCTTCCTTGTCTTGGATCTTTTGCTTCACGGCTTGG--ATGGTGTCGGAGGACT 1256 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 1255 CGACCTCAAGGGTAATCGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 1204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905030449828200