Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1654 86.0 8e-11 >seq1654 Length=5498 Score = 86.0 bits (94), Expect = 8e-11 Identities = 66/78 (85%), Gaps = 4/78 (5%) Strand=Plus/Plus Query 60589 TAGTTAAGTGGTAAAATTCCTGCTTCGGGTGCAGGAGGCCCCGGTTCGATTCCGGGCGGC 60648 |||||||||||||||||||| ||||||||||| |||||||| ||||||||||| || | Sbjct 4543 TAGTTAAGTGGTAAAATTCCCGCTTCGGGTGCGGGAGGCCCGGGTTCGATTCCCGGTTTC 4602 Query 60649 GCCCACCACTCttttttt 60666 |||| || ||||||| Sbjct 4603 GCCC----CTTTTTTTTT 4616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106373618572293