Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq6462 84.2 2e-11 >seq6462 Length=11053 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| |||| |||| || | || || | ||||||||| |||||||| || ||||| Sbjct 7159 ATCTTCGAGCTGTTGGCCACCAAAAATTAAGCGTTGCTGATCGGGCGGAATCCCTTCTTT 7218 Query 29691 GTCTTGTAATTTTTGTTTGACAGT 29714 |||||| | |||||||||||| || Sbjct 7219 GTCTTGAATTTTTTGTTTGACTGT 7242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385175401660389