Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq6235 123 2e-23 seq2450 114 1e-20 seq1860 111 2e-19 seq5736 105 6e-18 seq2282 105 6e-18 seq147 91.5 1e-13 seq1856 87.8 2e-12 seq1292 84.2 2e-11 >seq6235 Length=3334 Score = 123 bits (136), Expect = 2e-23 Identities = 151/201 (75%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || |||||||| | ||| ||| ||||||||||||||| || Sbjct 944 GTAGATTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGACC-GTCCTCGAGCTGCTTCCC 886 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| |||||||| ||||||||||| |||||||||||| Sbjct 885 GGCGAAGATCAATCGTTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGGATCTTTTGCTT 826 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | || | | ||||||| | ||| || |||| |||| ||| ||||| ||||| | Sbjct 825 CA-CAGCTTGGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTGCCAGTCAGGG 767 Query 133642 TTTTTACGAAAATCTGCATGG 133662 |||| || || |||||||||| Sbjct 766 TTTTGACAAAGATCTGCATGG 746 Score = 120 bits (132), Expect = 3e-22 Identities = 149/199 (75%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||||||| | ||| ||| |||||| |||||||| || Sbjct 1400 GTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACC-GTCCTCAAGCTGCTTTCC 1342 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || | || || ||||| || ||||| ||||||||||| |||||||||||| Sbjct 1341 CGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTGGATCTTTTGCTT 1282 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | || | | ||||||| || ||| || || | ||| | || || || |||| || Sbjct 1281 CA-CGGCTTGGATGGTGTCGGAGGACTCGACCTCAAGGGTAATCGTCTTTCCCGTCAAAG 1223 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||||||||| |||||||| Sbjct 1222 TTTTTACGAAGATCTGCAT 1204 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || || || || || ||||||||| | ||| | ||||||||||||||||| Sbjct 1172 GTAGATTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGCCCATCCTCGAGCTGCTTGCCG 1113 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| || || ||||| || ||||| ||||||||||| ||||||||||| Sbjct 1112 GCGAAGATGAGGCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTGAATCTTTTGCTTC 1053 Query 133584 AGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | | ||||||| || || || |||| |||| || || ||||| || || Sbjct 1052 A-CAGCTTGGATGGTGTCGGAGGATTCGACTTCGAGAGTGATAGTCTTACCGGTGAGGGT 994 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 993 CTTGACAAAGATCTGCAT 976 Score = 104 bits (114), Expect = 2e-17 Identities = 118/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| ||| | || | || || ||||| |||||||| ||||||||| Sbjct 1586 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGAGGGATTCCTTCCTTG 1527 Query 133566 TCGGTGATCTTTTGCTTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 || ||||||||||| | | || | | || |||| || ||| || |||| || | Sbjct 1526 TCTTGAATCTTTTGCTTCA-CAGCTTGGATGGTATCGGAGGACTCGACTTCGAGAGTAAT 1468 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||| |||||| |||||||| ||||| Sbjct 1467 CGTCTTTCCCGTCAAAGTTTTCACGAAAATTTGCAT 1432 >seq2450 Length=27238 Score = 114 bits (126), Expect = 1e-20 Identities = 149/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||||||| | ||| ||| |||||||||||||||||| Sbjct 7408 GTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACC-GTCCTCGAGCTGCTTGCC 7350 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || || || ||||||||||| || |||||||| Sbjct 7349 AGCGAAGATCAATCGTTGTTGGTCAGGGGGAATACCTTCCTTGTCTTGAATTTTTTGCTT 7290 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 || | || | | ||||| | | ||| || || | ||| | || || || |||| || Sbjct 7289 GA-CGGCTTGGATGGTGTCAGAAGACTCGACCTCCAGGGTAATTGTCTTTCCCGTCAAAG 7231 Query 133642 TTTTTACGAAAATCTGCATGG 133662 ||||||||||||||||||||| Sbjct 7230 TTTTTACGAAAATCTGCATGG 7210 Score = 114 bits (126), Expect = 1e-20 Identities = 148/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | ||| ||| |||||||||||||||||| Sbjct 9092 GTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACC-GTCCTCGAGCTGCTTGCC 9034 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || || || ||||||||||| || |||||||| Sbjct 9033 AGCGAAGATCAATCGTTGTTGGTCAGGGGGAATACCTTCCTTGTCTTGAATTTTTTGCTT 8974 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 || | || | | ||||||| || ||| || || | ||| | || || || |||| || Sbjct 8973 GA-CGGCTTGGATGGTGTCGGAGGACTCGACCTCAAGGGTAATTGTCTTTCCCGTCAAAG 8915 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 8914 TTTTCACGAAGATCTGCAT 8896 Score = 111 bits (122), Expect = 2e-19 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||||||| | ||| ||| |||||||||||||||||| Sbjct 9548 GTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACC-GTCCTCGAGCTGCTTGCC 9490 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || ||||| ||||||||||| ||| || ||||| Sbjct 9489 AGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTGGATTTTCTGCTT 9430 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | || | | || |||| || ||| || |||| |||| || || ||||| || | Sbjct 9429 CA-CAGCTTGGATGGTATCGGAGGACTCGACTTCGAGAGTGATAGTCTTACCGGTGAGCG 9371 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 9370 TTTTGACGAAGATCTGCAT 9352 Score = 109 bits (120), Expect = 5e-19 Identities = 148/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | ||| ||| |||||||||||||||||| Sbjct 8864 GTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACC-GTCCTCGAGCTGCTTGCC 8806 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || ||||| ||||||||||| ||||| || || Sbjct 8805 GGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTGAATCTTCTGTTT 8746 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | || | | ||||||| | ||| || |||| |||| || || ||||| || | Sbjct 8745 CA-CGGCTTGGATGGTGTCGGAAGACTCGACTTCGAGAGTGATAGTCTTCCCGGTGAGGG 8687 Query 133642 TTTTTACGAAAATCTGCATGG 133662 | || |||||||| ||||||| Sbjct 8686 TCTTGACGAAAATTTGCATGG 8666 Score = 105 bits (116), Expect = 6e-18 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || || || || ||||||||| | ||| ||| |||||| ||||||||||| Sbjct 7864 GTCGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACC-GTCCTCAAGCTGCTTGCC 7806 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| |||||||| ||||||||||| ||||||||||| Sbjct 7805 GGCGAAGATCAATCGTTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTTTGCTT 7746 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 || | || | | ||||| | | ||| || || | ||| | || || || |||| || Sbjct 7745 GA-CGGCTTGGATGGTGTCAGAAGACTCGACCTCAAGGGTAATAGTCTTTCCCGTCAAAG 7687 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| |||||||| ||||| Sbjct 7686 TTTTCACGAAAATTTGCAT 7668 Score = 105 bits (116), Expect = 6e-18 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | ||| ||| |||||||||||||||||| Sbjct 9320 GTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACC-GTCCTCGAGCTGCTTGCC 9262 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || ||||| ||||||||||| ||||| || || Sbjct 9261 AGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTGAATCTTCTGTTT 9202 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | || | | || |||| || ||| || |||| |||| || || ||||| || | Sbjct 9201 CA-CGGCTTGGATGGTATCGGAGGACTCAACTTCGAGAGTGATAGTCTTACCGGTGAGGG 9143 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 9142 TCTTGACGAAGATCTGCAT 9124 Score = 102 bits (112), Expect = 8e-17 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || || || || ||||||||| | ||| ||| | |||||||||||||| || Sbjct 7636 GTAGATTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCA-TCCTCGAGCTGCTTTCC 7578 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || ||||| ||||||||||| ||| || || || Sbjct 7577 GGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTGGATTTTCTGTTT 7518 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | || | | ||||||| || ||| || || | ||| | || || || |||| || Sbjct 7517 CA-CGGCTTGGATGGTGTCGGAGGACTCGACCTCAAGGGTAATAGTCTTTCCCGTCAAAG 7459 Query 133642 TTTTTACGAAAATCTGCAT 133660 ||||||||||||| ||||| Sbjct 7458 TTTTTACGAAAATTTGCAT 7440 >seq1860 Length=4765 Score = 111 bits (122), Expect = 2e-19 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || || || || ||||||||| | ||| ||| | ||||||||||||||||| Sbjct 1761 GTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCA-TCCTCGAGCTGCTTGCC 1819 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || ||||||||||||||||| ||| || ||||| Sbjct 1820 AGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATTTTCTGCTT 1879 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | || | | || |||| || ||| || || | ||| | ||| || || |||| || Sbjct 1880 CA-CAGCTTGGATGGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTTCCCGTCAAAG 1938 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 1939 TTTTCACGAAGATCTGCAT 1957 Score = 111 bits (122), Expect = 2e-19 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || || || || ||||||||| | ||| ||| | ||||||||||||||||| Sbjct 2217 GTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCA-TCCTCGAGCTGCTTGCC 2275 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || ||||||||||||||||| ||| || ||||| Sbjct 2276 AGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATTTTCTGCTT 2335 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | || | | || |||| || ||| || || | ||| | ||| || || |||| || Sbjct 2336 CA-CAGCTTGGATGGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTTCCCGTCAAAG 2394 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 2395 TTTTCACGAAGATCTGCAT 2413 Score = 107 bits (118), Expect = 2e-18 Identities = 147/200 (74%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || || || || ||||||||| | ||| ||| | ||||||||||||||||| Sbjct 2445 GTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCA-TCCTCGAGCTGCTTGCC 2503 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || ||||||||||||||||| ||| || ||||| Sbjct 2504 AGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATTTTCTGCTT 2563 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | || | | || |||| || ||| || || | ||| | ||| || || |||| || Sbjct 2564 CA-CAGCTTGGATGGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTTCCCGTCAAAG 2622 Query 133642 TTTTTACGAAAATCTGCATG 133661 |||| ||||| || |||||| Sbjct 2623 TTTTCACGAAGATTTGCATG 2642 Score = 105 bits (116), Expect = 6e-18 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || || || || ||||||||| | ||| ||| | ||||||||||||||||| Sbjct 1533 GTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCA-TCCTCGAGCTGCTTGCC 1591 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || ||||||||||||||||| ||| || ||||| Sbjct 1592 AGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATTTTCTGCTT 1651 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | || | | || |||| || ||| || || | ||| | || || || |||| || Sbjct 1652 CA-CAGCTTGGATGGTATCGGAGGACTCGACCTCAAGGGTAATAGTCTTTCCCGTCAAAG 1710 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 1711 TTTTCACGAAGATCTGCAT 1729 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/200 (72%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || || || ||||| || ||||||||| | || || || || || | ||||| | Sbjct 1989 GTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTCCGGCCG--TCTTCCAATTGCTTTC 2046 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | || || ||||| |||||||| ||||||||||| |||||||||| Sbjct 2047 CGGCGAAGATCAATCGTTGTTGGTCAGGAGGGATCCCTTCCTTGTCTTGAATCTTTTGCT 2106 Query 133582 TGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 | | | || | | ||||||| || ||| || || | ||| | || || || |||| | Sbjct 2107 TCA-CAGCTTGGATGGTGTCGGAGGACTCGACCTCAAGGGTAATAGTCTTTCCCGTCAAA 2165 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| ||||| |||||||| Sbjct 2166 GTTTTCACGAAGATCTGCAT 2185 >seq5736 Length=2708 Score = 105 bits (116), Expect = 6e-18 Identities = 147/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | ||| ||| | |||||||||||||| || Sbjct 2430 GTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCA-TCCTCGAGCTGCTTTCC 2372 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || || || ||||||||||| ||| || ||||| Sbjct 2371 GGCGAAGATCAATCGTTGTTGGTCAGGGGGAATACCTTCCTTGTCTTGGATTTTCTGCTT 2312 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | || | | ||||||| || ||| || |||| |||| || || || || || | Sbjct 2311 CA-CGGCTTGGATGGTGTCGGAGGACTCGACTTCGAGAGTGATAGTCTTTCCTGTGAGGG 2253 Query 133642 TTTTTACGAAAATCTGCATGG 133662 |||| ||||| || ||||||| Sbjct 2252 TTTTGACGAAGATTTGCATGG 2232 Score = 105 bits (116), Expect = 6e-18 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | ||| ||| | |||||||||||||| || Sbjct 2658 GTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCA-TCCTCGAGCTGCTTTCC 2600 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || ||||| ||||||||||| ||| || ||||| Sbjct 2599 GGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTGGATTTTCTGCTT 2540 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | || | | || |||| || ||| || |||| |||| || || ||||| || | Sbjct 2539 CA-CGGCTTGGATGGTATCGGAGGACTCAACTTCGAGAGTGATAGTCTTCCCGGTGAGGG 2481 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 2480 TCTTGACGAAGATCTGCAT 2462 >seq2282 Length=5406 Score = 105 bits (116), Expect = 6e-18 Identities = 147/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || || || || ||||||||| | ||| ||| | ||||||||||||||||| Sbjct 197 GTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCA-TCCTCGAGCTGCTTGCC 255 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || ||||| ||||||||||| ||| || || || Sbjct 256 AGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTGGATTTTCTGTTT 315 Query 133583 GAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | || | | ||||||| || ||| || || | ||| | || || || |||| || Sbjct 316 CA-CGGCTTGGATGGTGTCGGAGGACTCGACCTCAAGGGTAATTGTCTTTCCCGTCAAAG 374 Query 133642 TTTTTACGAAAATCTGCATGG 133662 ||||||| || |||||||||| Sbjct 375 TTTTTACAAAGATCTGCATGG 395 Score = 100 bits (110), Expect = 3e-16 Identities = 118/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| | || | || || ||||| || ||||| |||||||| Sbjct 10 GTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTT 69 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGA 133623 ||| ||| || || || | | || | | ||||||| | ||| || |||| |||| Sbjct 70 GTCTTGGATTTTCTGTTTCA-CAGCTTGGATGGTGTCGGAAGACTCGACTTCGAGAGTGA 128 Query 133624 CGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||| |||||||||||| |||||||| Sbjct 129 TCGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 165 >seq147 Length=786 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/186 (73%), Gaps = 4/186 (2%) Strand=Plus/Plus Query 133479 ATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCG 133537 || ||||||||| | ||| ||| |||||||||||||||||| ||| | || | || Sbjct 3 ATGTTGTAATCGGAAAGAGTGCGACC-GTCCTCGAGCTGCTTGCCAGCGAAGATCAATCG 61 Query 133538 CTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC-TCAACCG 133596 || ||||| || || || ||||||||||| ||||| || || | | || | | | Sbjct 62 TTGTTGGTCAGGGGGAATACCTTCCTTGTCTTGAATCTTCTGTTTCA-CGGCTTGGATGG 120 Query 133597 TGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCT 133656 |||||| | ||| || |||| |||| || || ||||| || || || |||||||| | Sbjct 121 TGTCGGAAGACTCGACTTCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAAATTT 180 Query 133657 GCATGG 133662 |||||| Sbjct 181 GCATGG 186 >seq1856 Length=6291 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || || ||||| || ||||||||| | ||| ||| || | ||||| || Sbjct 6168 GTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCTTCCAATTGCTTTCCG 6109 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| || || |||||||| || || ||||||||||| ||| || ||||| Sbjct 6108 GCGAAGATGAGGCGTTGTTGGTCGGGGGGAATACCTTCCTTGTCTTGGATTTTCTGCTTC 6049 Query 133584 AGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | | || |||| | ||| || |||| |||| || || ||||| || || Sbjct 6048 A-CAGCTTGGATGGTATCGGAAGACTCGACTTCGAGAGTGATAGTCTTACCGGTGAGGGT 5990 Query 133643 TTTTACGAAAATCTGCATGG 133662 ||| ||||| || ||||||| Sbjct 5989 TTTGACGAAGATTTGCATGG 5970 >seq1292 Length=4421 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||||||| | ||| ||| ||| || | ||||| || Sbjct 253 GTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACC-GTCTTCCAATTGCTTTCC 195 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || || ||||| || |||||||| |||||||| ||| || ||||| Sbjct 194 GGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATTTTCTGCTT 135 Query 133583 GAGCTGCTCA-ACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | ||| | ||||| | | ||| || || | ||| | || || || |||| || Sbjct 134 CA-CGGCTTGGATGGTGTCAGAAGACTCGACCTCAAGGGTAATTGTCTTTCCCGTCAAAG 76 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||||||||| |||||||| Sbjct 75 TTTTTACGAAGATCTGCAT 57 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483364427091960