Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2282 120 2e-22 seq1292 113 3e-20 seq5736 111 1e-19 seq2450 109 4e-19 seq1856 107 1e-18 seq6235 105 4e-18 seq1860 105 4e-18 seq7632 104 2e-17 seq147 82.4 5e-11 >seq2282 Length=5406 Score = 120 bits (132), Expect = 2e-22 Identities = 171/239 (72%), Gaps = 4/239 (2%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || || ||||| || ||||| || ||||| |||||||||||||| Sbjct 166 ACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGA 225 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || || || || || ||||| || || || || | || Sbjct 226 AAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGG 285 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA--ACATAGTCACGGTGTCGCTTGATTCC 33699 | |||||| ||||| ||||||||||||| | | | | ||||||| || || Sbjct 286 GATACCTTCCTTGTCTTGGATTTTCTGTTTCACGGCTTGG--ATGGTGTCGGAGGACTCG 343 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGT 33758 || |||| || || || || || || || |||||||||||||||||||| |||| ||| Sbjct 344 ACCTCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTTACAAAGATCTGCATGGTTGTTGT 402 Score = 86.0 bits (94), Expect = 4e-12 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 33586 GTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACA 33645 ||||| |||| || | || || ||||| || ||||| || || || || | || | | Sbjct 2 GTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATA 61 Query 33646 CCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTC 33704 ||||| ||||| ||||||||||||| || | | ||||||| || || || || Sbjct 62 CCTTCCTTGTCTTGGATTTTCTGTTTCA-CAGCTTGGATGGTGTCGGAAGACTCGACTTC 120 Query 33705 AACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||||||| || || || || |||||||| |||||||||||| Sbjct 121 GAGAGTGATCGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCATA 166 >seq1292 Length=4421 Score = 113 bits (124), Expect = 3e-20 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || || ||||| || ||||| || || || |||||||||||||| || ||||| || Sbjct 271 CGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCG 212 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || |||||||| |||||||| || ||||| || || || || | || | || || ||| Sbjct 211 TCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCCTCCTTG 152 Query 33655 TCGGCAATTTTCTGTTTCA--ACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 || |||||||| |||| | | | | |||||| || || || |||| || | Sbjct 151 TCTTGGATTTTCTGCTTCACGGCTTGG--ATGGTGTCAGAAGACTCGACCTCAAGGGTAA 94 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || || || |||||||| |||||||||||| Sbjct 93 TTGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCATA 56 >seq5736 Length=2708 Score = 111 bits (122), Expect = 1e-19 Identities = 169/239 (71%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || || ||||| || ||||| ||| || || |||||||||||||| Sbjct 2461 ACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGA 2402 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || |||||||| || ||||| || || || || | || Sbjct 2401 AAGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGG 2342 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA--ACATAGTCACGGTGTCGCTTGATTCC 33699 | |||||| ||||| |||||||| |||| | | | | ||||||| || || Sbjct 2341 AATACCTTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGG--ATGGTGTCGGAGGACTCG 2284 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGT 33758 || || | ||||| || || ||||| | ||||| || ||||| ||||| |||| ||| Sbjct 2283 ACTTCGAGAGTGATAGTCTTTCCTGTGAGGGTTTTGACGAAGATTTGCATGGTTGTTGT 2225 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || || ||||| || ||||| ||| || || |||||||||||||| Sbjct 2689 ACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGA 2630 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || |||||||| || ||||| || || || || | || Sbjct 2629 AAGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGG 2570 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA--ACATAGTCACGGTGTCGCTTGATTCC 33699 | |||||| ||||| |||||||| |||| | | | | ||| ||| || || Sbjct 2569 GATACCTTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGG--ATGGTATCGGAGGACTCA 2512 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| || || || || | || || || |||||||||||| Sbjct 2511 ACTTCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAGATCTGCATA 2461 >seq2450 Length=27238 Score = 109 bits (120), Expect = 4e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || ||||| || ||||| |||||||||||||| Sbjct 7667 ACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGA 7608 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || |||||||| || ||||| || || || || | || Sbjct 7607 AAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGG 7548 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA--ACATAGTCACGGTGTCGCTTGATTCC 33699 | |||||| ||||| ||||||||||||| | | | | ||||||| || || Sbjct 7547 GATACCTTCCTTGTCTTGGATTTTCTGTTTCACGGCTTGG--ATGGTGTCGGAGGACTCG 7490 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || |||| || || || || || || || |||||||| || || |||||| Sbjct 7489 ACCTCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTTACGAAAATTTGCATA 7439 Score = 102 bits (112), Expect = 5e-17 Identities = 167/239 (70%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || || ||||| || ||||| ||| || || |||||||||||||| Sbjct 8895 ACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGA 8836 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | || || ||||| || ||||| || || || || | || Sbjct 8835 AAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGGGG 8776 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA--ACATAGTCACGGTGTCGCTTGATTCC 33699 | |||||| ||||| ||| |||||||||| | | | | ||||||| || || Sbjct 8775 GATACCTTCCTTGTCTTGAATCTTCTGTTTCACGGCTTGG--ATGGTGTCGGAAGACTCG 8718 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGT 33758 || || | ||||| || || || || | || || || || || ||||| |||| ||| Sbjct 8717 ACTTCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAAATTTGCATGGTTGTTGT 8659 Score = 100 bits (110), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || || ||||| || ||||| ||| || || |||||||||||||| Sbjct 9123 ACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGA 9064 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | || || || || || ||||| || || || || | || Sbjct 9063 AAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGG 9004 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTT--CAACATAGTCACGGTGTCGCTTGATTCC 33699 | |||||| ||||| |||||| || || | | | | | ||||||| || || Sbjct 9003 AATACCTTCCTTGTCTTGAATTTTTTGCTTGACGGCTTGG--ATGGTGTCGGAGGACTCG 8946 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || |||| || || || || || || || ||||| || |||||||||||| Sbjct 8945 ACCTCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCATA 8895 Score = 100 bits (110), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || || ||||| || ||||| ||| || || |||||||||||||| Sbjct 9351 ACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGA 9292 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | || || || || || ||||| || || || || | || Sbjct 9291 AAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGG 9232 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA--ACATAGTCACGGTGTCGCTTGATTCC 33699 | |||||| ||||| ||| |||||||||| | | | | ||| ||| || || Sbjct 9231 GATACCTTCCTTGTCTTGAATCTTCTGTTTCACGGCTTGG--ATGGTATCGGAGGACTCA 9174 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| || ||||| || | || || || |||||||||||| Sbjct 9173 ACTTCGAGAGTGATAGTCTTACCGGTGAGGGTCTTGACGAAGATCTGCATA 9123 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || || ||||| || ||||| || || || |||||||||||||| || ||||| || Sbjct 9566 CGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCG 9507 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || || | || || || || || ||||| || || || || | || | |||||| ||| Sbjct 9506 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTG 9447 Query 33655 TCGGCAATTTTCTGTTTCA-ACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || |||||||| |||| | | | | ||| ||| || || || || | ||||| Sbjct 9446 TCTTGGATTTTCTGCTTCACAGCTTG-GATGGTATCGGAGGACTCGACTTCGAGAGTGAT 9388 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || ||||| || | |||||| || |||||||||||| Sbjct 9387 AGTCTTACCGGTGAGCGTTTTGACGAAGATCTGCATA 9351 Score = 93.3 bits (102), Expect = 3e-14 Identities = 165/239 (69%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || ||||| || || || |||||||||||||| Sbjct 7439 ACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGA 7380 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | || || || || || ||||| || || || || | || Sbjct 7379 AAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGG 7320 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTT--CAACATAGTCACGGTGTCGCTTGATTCC 33699 | |||||| ||||| |||||| || || | | | | | |||||| || || Sbjct 7319 AATACCTTCCTTGTCTTGAATTTTTTGCTTGACGGCTTGG--ATGGTGTCAGAAGACTCG 7262 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGT 33758 || || | || || || || || || || |||||||| || |||||||| |||| ||| Sbjct 7261 ACCTCCAGGGTAATTGTCTTTCCCGTCAAAGTTTTTACGAAAATCTGCATGGTTGTTGT 7203 Score = 84.2 bits (92), Expect = 1e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || ||||| || ||||| |||||||||||||| || ||||| |||| || Sbjct 7876 ACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCGTCCTCA 7817 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || ||||| || ||||| || || || || | || | |||||| ||||| | Sbjct 7816 AGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGA 7757 Query 33661 ATTTTCTGTTT--CAACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || || || | | | | | |||||| || || || |||| || || || | Sbjct 7756 ATCTTTTGCTTGACGGCTTGG--ATGGTGTCAGAAGACTCGACCTCAAGGGTAATAGTCT 7699 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || ||||| || || || |||||| Sbjct 7698 TTCCCGTCAAAGTTTTCACGAAAATTTGCATA 7667 >seq1856 Length=6291 Score = 107 bits (118), Expect = 1e-18 Identities = 168/238 (71%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || || ||||| || ||||| || || || |||||||||||||| Sbjct 6199 ACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGA 6140 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| |||||||| |||||||| || || | || || || || | || Sbjct 6139 AAGGGTGCGGCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGTTGTTGGTCGGGGGG 6080 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA-ACATAGTCACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| |||||||| |||| | | | | ||| ||| || || | Sbjct 6079 AATACCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTG-GATGGTATCGGAAGACTCGA 6021 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGT 33758 | || | ||||| || ||||| || | ||||| || ||||| ||||| || | ||| Sbjct 6020 CTTCGAGAGTGATAGTCTTACCGGTGAGGGTTTTGACGAAGATTTGCATGGTAGTTGT 5963 >seq6235 Length=3334 Score = 105 bits (116), Expect = 4e-18 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || ||||| || || || |||||||||||||| Sbjct 1431 ACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGA 1372 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | || ||||| || || ||||| || || || || | || Sbjct 1371 AAGAGTGCGACCGTCCTCAAGCTGCTTTCCCGCGAAGATCAATCGTTGTTGGTCAGGGGG 1312 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA--ACATAGTCACGGTGTCGCTTGATTCC 33699 | |||||| ||||| || || || |||| | | | | ||||||| || || Sbjct 1311 GATACCTTCCTTGTCTTGGATCTTTTGCTTCACGGCTTGG--ATGGTGTCGGAGGACTCG 1254 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || |||| || ||||| || || || || |||||||| |||||||||||| Sbjct 1253 ACCTCAAGGGTAATCGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCATA 1203 Score = 98.7 bits (108), Expect = 7e-16 Identities = 170/243 (70%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || || ||||| || ||||| || || || ||||||||||| || Sbjct 975 ACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCAGA 916 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | || || ||||| || ||||| || || || || | || Sbjct 915 AAGGGTGCGACCGTCCTCGAGCTGCTTCCCGGCGAAGATCAATCGTTGTTGGTCAGGAGG 856 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA-ACATAGTCACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || || |||| | | | | ||||||| || || | Sbjct 855 GATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTG-GATGGTGTCGGAAGACTCGA 797 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTG-TG 33759 | || | ||||| || || || || | ||||| |||||||||||||| |||| || || Sbjct 796 CCTCGAGAGTGATGGTCTTGCCAGTCAGGGTTTTGACAAAGATCTGCATGGTTGTTGTTG 737 Query 33760 TTT 33762 ||| Sbjct 736 TTT 734 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || || ||||| || ||||| || ||||| |||||||||||||| Sbjct 1203 ACCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGA 1144 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || || ||||| || || | || || || || | || Sbjct 1143 AAGGGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGTTGTTGGTCAGGGGG 1084 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA-ACATAGTCACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || || |||| | | | | ||||||| ||||| | Sbjct 1083 GATACCTTCCTTGTCTTGAATCTTTTGCTTCACAGCTTG-GATGGTGTCGGAGGATTCGA 1025 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || ||||| || | || || ||||||||||||||| Sbjct 1024 CTTCGAGAGTGATAGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCATA 975 >seq1860 Length=4765 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || || || || || ||||| || || || |||||||||||||| Sbjct 1958 ACCACCACGAAGGCGCAAGACTAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGA 2017 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || |||| |||||||| |||||||| || ||||| || || || || | || Sbjct 2018 AAGGGTCCGGCCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGAGG 2077 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA-ACATAGTCACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||| || || |||| | | | | ||||||| || || | Sbjct 2078 GATCCCTTCCTTGTCTTGAATCTTTTGCTTCACAGCTTG-GATGGTGTCGGAGGACTCGA 2136 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || || || || || ||||| || |||||||||||| Sbjct 2137 CCTCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCATA 2186 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || ||||| || ||||| |||||||||||||| Sbjct 1730 ACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGA 1789 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || || || || || ||||| || || || || | || Sbjct 1790 AAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGG 1849 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA-ACATAGTCACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| |||||||| |||| | | | | ||| ||| || || | Sbjct 1850 GATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTG-GATGGTATCGGAGGACTCGA 1908 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || || || || || ||||| || |||||||||||| Sbjct 1909 CCTCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCATA 1958 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || ||||| || ||||| |||||||||||||| Sbjct 2186 ACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGA 2245 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || || || || || ||||| || || || || | || Sbjct 2246 AAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGG 2305 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA-ACATAGTCACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| |||||||| |||| | | | | ||| ||| || || | Sbjct 2306 GATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTG-GATGGTATCGGAGGACTCGA 2364 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || || || || || ||||| || |||||||||||| Sbjct 2365 CCTCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCATA 2414 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || || ||||| || ||||| || ||||| |||||||||||||| || ||||| | Sbjct 1515 CGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCA 1574 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || || | || || || || || ||||| || || || || | || | ||||| ||| Sbjct 1575 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCTTCCTTG 1634 Query 33655 TCGGCAATTTTCTGTTTCA-ACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || |||||||| |||| | | | | ||| ||| || || || |||| || || Sbjct 1635 TCTTGGATTTTCTGCTTCACAGCTTG-GATGGTATCGGAGGACTCGACCTCAAGGGTAAT 1693 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || || || || ||||| || |||||||||||| Sbjct 1694 AGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCATA 1730 Score = 91.5 bits (100), Expect = 1e-13 Identities = 170/245 (69%), Gaps = 5/245 (2%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || ||||| || ||||| |||||||||||||| Sbjct 2414 ACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGA 2473 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || || || || || ||||| || || || || | || Sbjct 2474 AAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGG 2533 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA-ACATAGTCACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| |||||||| |||| | | | | ||| ||| || || | Sbjct 2534 GATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTG-GATGGTATCGGAGGACTCGA 2592 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCA--TAGTTGGTG- 33757 | |||| || || || || || || || ||||| || ||||| |||| | ||||||| Sbjct 2593 CCTCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATTTGCATGTTGTTGGTGT 2652 Query 33758 TGTTT 33762 ||||| Sbjct 2653 TGTTT 2657 >seq7632 Length=1044 Score = 104 bits (114), Expect = 2e-17 Identities = 155/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || || ||||| || ||||| || || || |||||||||||||| || ||||| || Sbjct 684 CGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCG 743 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || |||||||| |||||||| || ||||| || || || || | || | || || ||| Sbjct 744 TCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCCTCCTTG 803 Query 33655 TCGGCAATTTTCTGTTTCA--ACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 || |||||||| |||| | | | | ||||| || || || |||| || | Sbjct 804 TCTTGGATTTTCTGCTTCACGGCTTGG--ATAGTGTCAGAAGACTCGACCTCAAGGGTAA 861 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || || || ||||| || |||||||||||| Sbjct 862 TTGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCATA 899 >seq147 Length=786 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 33568 ATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGC 33627 |||||||||||||| || ||||| |||| || | || || || || || ||||| || Sbjct 3 ATGTTGTAATCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGT 62 Query 33628 TGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCA--ACATAGTCACGG 33685 || || || | || | |||||| ||||| ||| |||||||||| | | | | || Sbjct 63 TGTTGGTCAGGGGGAATACCTTCCTTGTCTTGAATCTTCTGTTTCACGGCTTGG--ATGG 120 Query 33686 TGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCT 33745 ||||| || || || || | ||||| || || || || | || || || || || | Sbjct 121 TGTCGGAAGACTCGACTTCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAAATTT 180 Query 33746 GCATAGTTGGTGT 33758 |||| |||| ||| Sbjct 181 GCATGGTTGTTGT 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328666627279680