Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq6235 125 6e-24 seq1860 125 6e-24 seq2450 122 8e-23 seq7632 116 3e-21 seq2282 113 4e-20 seq1292 113 4e-20 seq5736 95.1 1e-14 seq1856 89.7 5e-13 >seq6235 Length=3334 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| ||||| || | ||| ||||| || ||||||||||| | Sbjct 974 CCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCAGAA 915 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| || |||||||| || || || ||||| || || ||||| | ||| Sbjct 914 AGGGTGCGACCGTCCTCGAGCTGCTTCCCGGCGAAGATCAATCGTTGTTGGTCAGGAGGG 855 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||||||||||| || | | |||||| || || ||| Sbjct 854 ATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTGGATGGTGTCGGAAGACTCGACC 795 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || |||| ||||| ||||| |||||||| Sbjct 794 TCGAGAGTGATGGTCTTGCCAGTCAGGGTTTTGACAAAGATCTGCAT 748 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| ||||| || ||||||||||||| Sbjct 1430 CCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGAA 1371 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || |||||||| ||||| || ||||| || || ||||| | || Sbjct 1370 AGAGTGCGACCGTCCTCAAGCTGCTTTCCCGCGAAGATCAATCGTTGTTGGTCAGGGGGG 1311 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||||||||||| | | | |||||| || || ||| Sbjct 1310 ATACCTTCCTTGTCTTGGATCTTTTGCTTCACGGCTTGGATGGTGTCGGAGGACTCGACC 1251 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || ||||| || |||||||||||||| || || |||||||| Sbjct 1250 TCAAGGGTAATCGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 1204 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| ||||| || | ||| |||||||| ||||||||||||| Sbjct 1202 CCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAA 1143 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| ||| | || || |||||||| || || || || | || || ||||| | || Sbjct 1142 AGGGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGTTGTTGGTCAGGGGGG 1083 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| ||||||||||||| || | | |||||| ||||| || Sbjct 1082 ATACCTTCCTTGTCTTGAATCTTTTGCTTCACAGCTTGGATGGTGTCGGAGGATTCGACT 1023 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || ||||| || | || || ||||| |||||||| Sbjct 1022 TCGAGAGTGATAGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCAT 976 Score = 91.5 bits (100), Expect = 1e-13 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 35559 TGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCT 35618 ||||||||| | || || | || || |||||||| || || || ||||| || || | Sbjct 1609 TGTAATCGGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTT 1550 Query 35619 GGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGC 35678 |||| | ||| | | |||||||| ||||||||||||| || | | || ||| Sbjct 1549 GGTCAGGAGGGATTCCTTCCTTGTCTTGAATCTTTTGCTTCACAGCTTGGATGGTATCGG 1490 Query 35679 TCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || || | || ||||| || ||||||||||||||||| || || ||||| Sbjct 1489 AGGACTCGACTTCGAGAGTAATCGTCTTTCCCGTCAAAGTTTTCACGAAAATTTGCAT 1432 >seq1860 Length=4765 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| || || || | ||| ||||| || ||||||||||||| Sbjct 1959 CCACCACGAAGGCGCAAGACTAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGAA 2018 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| |||| ||||| || || || ||||| || || ||||| | ||| Sbjct 2019 AGGGTCCGGCCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGAGGG 2078 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| ||||||||||||| || | | |||||| || || ||| Sbjct 2079 ATCCCTTCCTTGTCTTGAATCTTTTGCTTCACAGCTTGGATGGTGTCGGAGGACTCGACC 2138 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || || ||||||||||||||||| || |||||||| Sbjct 2139 TCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 2185 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| ||||| || | ||| |||||||| ||||||||||||| Sbjct 1503 CCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAA 1562 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| || || ||||| | || Sbjct 1563 AGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGG 1622 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||| ||| || ||||||| || | | || ||| || || ||| Sbjct 1623 ATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTCGACC 1682 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || || ||||||||||||||||| || |||||||| Sbjct 1683 TCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 1729 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||||| ||||||||||||| Sbjct 1731 CCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAA 1790 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| || || ||||| | || Sbjct 1791 AGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGG 1850 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||| ||| || ||||||| || | | || ||| || || ||| Sbjct 1851 ATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTCGACC 1910 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || || ||||||||||||||||| || |||||||| Sbjct 1911 TCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 1957 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||||| ||||||||||||| Sbjct 2187 CCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAA 2246 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| || || ||||| | || Sbjct 2247 AGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGG 2306 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||| ||| || ||||||| || | | || ||| || || ||| Sbjct 2307 ATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTCGACC 2366 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || || ||||||||||||||||| || |||||||| Sbjct 2367 TCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 2413 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||||| ||||||||||||| Sbjct 2415 CCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAA 2474 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| || || ||||| | || Sbjct 2475 AGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGG 2534 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||| ||| || ||||||| || | | || ||| || || ||| Sbjct 2535 ATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTCGACC 2594 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || || ||||||||||||||||| || || ||||| Sbjct 2595 TCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATTTGCAT 2641 >seq2450 Length=27238 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| ||||| || | ||| |||||| || ||||||||||||| Sbjct 9122 CCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAA 9063 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || |||||||| || || || ||||| || || ||||| | ||| Sbjct 9062 AGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGA 9003 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| || |||||||| | | | | |||||| || || ||| Sbjct 9002 ATACCTTCCTTGTCTTGAATTTTTTGCTTGACGGCTTGGATGGTGTCGGAGGACTCGACC 8943 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || || ||||||||||||||||| || |||||||| Sbjct 8942 TCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 8896 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| ||||||||||||| | || || |||| || |||||||| || || || Sbjct 7858 TCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAG 7799 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| || || ||||| | ||| | | |||||||| ||||||||||| | | | Sbjct 7798 ATCAATCGTTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTTTGCTTGACGGCT 7739 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | ||||| || || ||||| | || || || || ||||||||||||||||| Sbjct 7738 TGGATGGTGTCAGAAGACTCGACCTCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTCACG 7679 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 7678 AAAATTTGCAT 7668 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| ||||| || ||||||||||||| Sbjct 7438 CCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGAA 7379 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || |||||||| || || || ||||| || || ||||| | ||| Sbjct 7378 AGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGA 7319 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| || |||||||| | | | | ||||| || || ||| Sbjct 7318 ATACCTTCCTTGTCTTGAATTTTTTGCTTGACGGCTTGGATGGTGTCAGAAGACTCGACC 7259 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || || || |||||||||||||| || || |||||||| Sbjct 7258 TCCAGGGTAATTGTCTTTCCCGTCAAAGTTTTTACGAAAATCTGCAT 7212 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||||| ||||||||||||| Sbjct 7666 CCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAA 7607 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || ||||| || || ||||| | || Sbjct 7606 AGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGG 7547 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| ||| || || |||| | | | |||||| || || ||| Sbjct 7546 ATACCTTCCTTGTCTTGGATTTTCTGTTTCACGGCTTGGATGGTGTCGGAGGACTCGACC 7487 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || || |||||||||||||| || || || ||||| Sbjct 7486 TCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTTACGAAAATTTGCAT 7440 Score = 98.7 bits (108), Expect = 9e-16 Identities = 163/234 (70%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 35504 TTATT-TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTA 35562 ||||| ||| ||||| | | ||| ||||| || | ||| ||||| || |||||||| Sbjct 9585 TTATTGTCCTCCACGAAGGCGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTA 9526 Query 35563 ATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC 35622 ||||| | || || |||| || |||||||| || || || ||||| || || ||||| Sbjct 9525 ATCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTC 9466 Query 35623 CGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGA 35682 | || | | |||||||| ||| || ||||||| || | | || ||| || Sbjct 9465 AGGGGGGATACCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGA 9406 Query 35683 TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || | ||||| || ||||| || | ||||| || || |||||||| Sbjct 9405 CTCGACTTCGAGAGTGATAGTCTTACCGGTGAGCGTTTTGACGAAGATCTGCAT 9352 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| ||||| || | ||| |||||| || ||||||||||||| Sbjct 9350 CCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAA 9291 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || |||||||| || || || ||||| || || ||||| | || Sbjct 9290 AGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGG 9231 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| ||||| || |||| | | | || ||| || || || Sbjct 9230 ATACCTTCCTTGTCTTGAATCTTCTGTTTCACGGCTTGGATGGTATCGGAGGACTCAACT 9171 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || ||||| || | || || || || |||||||| Sbjct 9170 TCGAGAGTGATAGTCTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 9124 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| ||||| || | ||| |||||| || ||||||||||||| Sbjct 8894 CCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAA 8835 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || |||||||| || || || ||||| || || ||||| | || Sbjct 8834 AGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGG 8775 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| ||||| || |||| | | | |||||| || || || Sbjct 8774 ATACCTTCCTTGTCTTGAATCTTCTGTTTCACGGCTTGGATGGTGTCGGAAGACTCGACT 8715 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || || | || || || || || ||||| Sbjct 8714 TCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAAATTTGCAT 8668 >seq7632 Length=1044 Score = 116 bits (128), Expect = 3e-21 Identities = 167/234 (71%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 35504 TTATT-TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTA 35562 ||||| ||| ||||| | | ||| ||||| || | ||| ||||| || |||||||| Sbjct 665 TTATTGTCCTCCACGAAGGCGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTA 724 Query 35563 ATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC 35622 ||||| | || || |||| |||| ||||| || || || ||||| || || ||||| Sbjct 725 ATCGGAAAGAGTGCGACCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTC 784 Query 35623 CGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGA 35682 | || | || ||||||||| ||| || ||||||| | | | ||||| || Sbjct 785 AGGGGGGATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATAGTGTCAGAAGA 844 Query 35683 TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||| | || || || || ||||||||||||||||| || |||||||| Sbjct 845 CTCGACCTCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 898 >seq2282 Length=5406 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| ||||| || | ||| |||||||| ||||||||||||| Sbjct 167 CCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAA 226 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| || || ||||| | || Sbjct 227 AGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGG 286 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| ||| || || |||| | | | |||||| || || ||| Sbjct 287 ATACCTTCCTTGTCTTGGATTTTCTGTTTCACGGCTTGGATGGTGTCGGAGGACTCGACC 346 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || || |||||||||||||| ||||| |||||||| Sbjct 347 TCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTTACAAAGATCTGCAT 393 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 35580 CGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCT 35639 |||| || |||||||| || || || ||||| || || ||||| | || | | |||| Sbjct 9 CGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCT 68 Query 35640 TGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGA 35699 |||| ||| || || |||| || | | |||||| || || || || | |||| Sbjct 69 TGTCTTGGATTTTCTGTTTCACAGCTTGGATGGTGTCGGAAGACTCGACTTCGAGAGTGA 128 Query 35700 TCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || |||||||||||||| || || |||||||| Sbjct 129 TCGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 165 >seq1292 Length=4421 Score = 113 bits (124), Expect = 4e-20 Identities = 166/234 (71%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 35504 TTATT-TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTA 35562 ||||| ||| ||||| | | ||| ||||| || | ||| ||||| || |||||||| Sbjct 290 TTATTGTCCTCCACGAAGGCGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTA 231 Query 35563 ATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC 35622 ||||| | || || |||| |||| ||||| || || || ||||| || || ||||| Sbjct 230 ATCGGAAAGAGTGCGACCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTC 171 Query 35623 CGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGA 35682 | || | || ||||||||| ||| || ||||||| | | | ||||| || Sbjct 170 AGGGGGGATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATGGTGTCAGAAGA 111 Query 35683 TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||| | || || || || |||||||||||||| || || |||||||| Sbjct 110 CTCGACCTCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 57 >seq5736 Length=2708 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| ||||| || | ||| |||||| || ||||||||||||| Sbjct 2460 CCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAA 2401 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| || || ||||| | ||| Sbjct 2400 AGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGA 2341 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| ||| || ||||||| | | | |||||| || || || Sbjct 2340 ATACCTTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATGGTGTCGGAGGACTCGACT 2281 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || || | ||||| || || || ||||| Sbjct 2280 TCGAGAGTGATAGTCTTTCCTGTGAGGGTTTTGACGAAGATTTGCAT 2234 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| ||||| || | ||| |||||| || ||||||||||||| Sbjct 2688 CCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAA 2629 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| || || ||||| | || Sbjct 2628 AGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGG 2569 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| ||| || ||||||| | | | || ||| || || || Sbjct 2568 ATACCTTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATGGTATCGGAGGACTCAACT 2509 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || || | || || || || |||||||| Sbjct 2508 TCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAGATCTGCAT 2462 >seq1856 Length=6291 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| ||||| || | ||| ||||| || ||||||||||||| Sbjct 6198 CCACCACGAAGGCGCAAGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGAA 6139 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| |||| ||||| || || || || | || || ||||| | ||| Sbjct 6138 AGGGTGCGGCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGTTGTTGGTCGGGGGGA 6079 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| ||| || ||||||| || | | || ||| || || || Sbjct 6078 ATACCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAAGACTCGACT 6019 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || ||||| || | ||||| || || || ||||| Sbjct 6018 TCGAGAGTGATAGTCTTACCGGTGAGGGTTTTGACGAAGATTTGCAT 5972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450741031831320