Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2332 96.9 4e-15 >seq2332 Length=5771 Score = 96.9 bits (106), Expect = 4e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 182697 TTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGCAACC 182756 || || ||||| || |||||||||||| |||||| ||||| || ||||| || Sbjct 3070 TTTCCACGAAGAGGAAACACACCGTAGAAATCACGCCCAACAACCCCAAGACCACACACT 3129 Query 182757 GCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGATTGTGCC 182816 || | |||||||| || || ||||| |||||||| || || || | | |||| || Sbjct 3130 GCCAACGTTTTCGCGGAGTCTCCCTCGGTGACAATCAGTGTGCATTCTGCAGAACTCGCT 3189 Query 182817 GTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACCGGT 182857 || ||||| ||||| || ||||||| ||| ||||| || || Sbjct 3190 GTTCCCGCTTTGTTGGCATCATCCAGCTTTGGAATCCCAGT 3230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627958763618400