Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2282 123 8e-23 seq6235 122 3e-22 seq2450 122 3e-22 seq1860 114 4e-20 seq5736 109 2e-18 seq1856 109 2e-18 seq1292 109 2e-18 seq7632 104 7e-17 seq5144 100 9e-16 seq6462 84.2 7e-11 >seq2282 Length=5406 Score = 123 bits (136), Expect = 8e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATC-TTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAAT 140565 |||||||||||| | | ||| |||| || |||||||| || ||||| || || |||| Sbjct 163 CATACCACCACGAAGGCGCAAGACCAAG-TGGAGAGTAGATTCCTTTTGGATGTTGTAAT 221 Query 140566 CAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 | || | || || ||||| || || || || ||||| ||||| | ||||| || |||| Sbjct 222 CGGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAG 281 Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 | || || ||||| || || || ||||| ||| || | || | || || | | Sbjct 282 GGGGGATACCTTCCTTGTCTTGGATTTTCTGTTTCACGGCTTGGATGGTGTCGGAGGACT 341 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || ||||| |||| ||||||||| || | ||||||||||| |||||||| Sbjct 342 CGACCTCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTTACAAAGATCTGCAT 393 >seq6235 Length=3334 Score = 122 bits (134), Expect = 3e-22 Identities = 170/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATC-TTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAAT 140565 |||||||||||| | | ||| |||| || |||||||| || ||||| || || |||| Sbjct 1206 CATACCACCACGAAGGCGCAAGACCAAG-TGGAGAGTAGATTCCTTTTGGATGTTGTAAT 1148 Query 140566 CAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 | || | || |||||||| || || || || || || ||||| || ||||| || |||| Sbjct 1147 CGGAAAGGGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGTTGTTGGTCAG 1088 Query 140626 GAGGAATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 | || || ||||| || || ||||| ||| || || ||| | || | || || | | Sbjct 1087 GGGGGATACCTTCCTTGTCTTGAATCTTTTGC-TTCACAGCTTGGATGGTGTCGGAGGAT 1029 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || | ||||| ||||| || || || ||||| |||||||| Sbjct 1028 TCGACTTCGAGAGTGATAGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCAT 976 Score = 107 bits (118), Expect = 6e-18 Identities = 167/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | || |||||||| || || || || || | Sbjct 1438 TTTGCATACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGT 1379 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || || || ||||| || ||||| || ||||| | ||||| || | Sbjct 1378 AATCGGAAAGAGTGCGACCGTCCTCAAGCTGCTTTCCCGCGAAGATCAATCGTTGTTGGT 1319 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGAT 140681 |||| || || ||||| || || || || ||| || || || | || | || || Sbjct 1318 CAGGGGGGATACCTTCCTTGTCTTGGATCTTTTGC-TTCACGGCTTGGATGGTGTCGGAG 1260 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || ||||| |||| |||||||| || | |||||||| || |||||||| Sbjct 1259 GACTCGACCTCAAGGGTAATCGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 1204 Score = 100 bits (110), Expect = 9e-16 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATC-TTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAAT 140565 |||||||||||| | | ||| |||| || |||||||| || || || || || |||| Sbjct 978 CATACCACCACGAAGGCGCAAGACCAAG-TGGAGAGTAGATTCCTTCTGGATGTTGTAAT 920 Query 140566 CAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 |||| | || || || || || || || || || || ||||| | ||||| || |||| Sbjct 919 CAGAAAGGGTGCGACCGTCCTCGAGCTGCTTCCCGGCGAAGATCAATCGTTGTTGGTCAG 860 Query 140626 GAGGAATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 |||| || ||||| || || || || ||| || || ||| | || | || || | Sbjct 859 GAGGGATACCTTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTGGATGGTGTCGGAAGAC 801 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || | ||||| || || || ||||| ||||| |||||||| Sbjct 800 TCGACCTCGAGAGTGATGGTCTTGCCAGTCAGGGTTTTGACAAAGATCTGCAT 748 >seq2450 Length=27238 Score = 122 bits (134), Expect = 3e-22 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | || |||||||| || || || || || | Sbjct 7446 TTTGCATACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGT 7387 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || || || || || || || ||||| ||||| | ||||| || | Sbjct 7386 AATCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGT 7327 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| ||||| || || |||||||| || || | || | ||||| | Sbjct 7326 CAGGGGGAATACCTTCCTTGTCTTGAATTTTTTGCTTGACGGCTTGGATGGTGTCAGAAG 7267 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || |||| ||||||||| || | |||||||| ||||||||||| Sbjct 7266 ACTCGACCTCCAGGGTAATTGTCTTTCCCGTCAAAGTTTTTACGAAAATCTGCAT 7212 Score = 118 bits (130), Expect = 3e-21 Identities = 167/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | || |||||||| || ||||| || || | Sbjct 7674 TTTGCATACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGT 7615 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || ||||| || || || ||||| || ||||| | ||||| || | Sbjct 7614 AATCGGAAAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGT 7555 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || || ||||| || || || ||||| ||| || | || | || || | Sbjct 7554 CAGGGGGGATACCTTCCTTGTCTTGGATTTTCTGTTTCACGGCTTGGATGGTGTCGGAGG 7495 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || ||||| |||| |||||||| || | |||||||| ||||| ||||| Sbjct 7494 ACTCGACCTCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTTACGAAAATTTGCAT 7440 Score = 114 bits (126), Expect = 4e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTA-GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAAT 140565 |||||||||||| | | | || |||| || ||||||||||| || || || || |||| Sbjct 9126 CATACCACCACGAAGGCGCAAGACCAAG-TGGAGAGTAGACTCCTTCTGGATGTTGTAAT 9068 Query 140566 CAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 | || | || || || || || || || || ||||| ||||| | ||||| || |||| Sbjct 9067 CGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAG 9008 Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 | ||||| ||||| || || |||||||| || || | || | || || | | Sbjct 9007 GGGGAATACCTTCCTTGTCTTGAATTTTTTGCTTGACGGCTTGGATGGTGTCGGAGGACT 8948 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || ||||| |||| ||||||||| || | ||||| || || |||||||| Sbjct 8947 CGACCTCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 8896 Score = 109 bits (120), Expect = 2e-18 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTA-GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAAT 140565 |||||||||||| | | | || |||| || ||||||||||| || || || || |||| Sbjct 9354 CATACCACCACGAAGGCGCAAGACCAAG-TGGAGAGTAGACTCCTTCTGGATGTTGTAAT 9296 Query 140566 CAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 | || | || || || || || || || || ||||| ||||| | ||||| || |||| Sbjct 9295 CGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAG 9236 Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 | || || ||||| || || ||||| || ||| || | || | ||| || | | Sbjct 9235 GGGGGATACCTTCCTTGTCTTGAATCTTCTGTTTCACGGCTTGGATGGTATCGGAGGACT 9176 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||| || || | ||||| ||||| || || || || || |||||||| Sbjct 9175 CAACTTCGAGAGTGATAGTCTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 9124 Score = 104 bits (114), Expect = 7e-17 Identities = 151/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||| |||| ||||||||||| || || || || || ||||| || | || || || || Sbjct 9562 AGACCAAG-TGAAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCC 9504 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||| ||||| | ||||| || ||||| || || ||||| || || Sbjct 9503 TCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCT 9444 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || ||||| || ||| | || | ||| || | || ||||| || || | ||| Sbjct 9443 TGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTCGACTTCGAGAGTGATAGTC 9384 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || ||||| || || |||||||| Sbjct 9383 TTACCGGTGAGCGTTTTGACGAAGATCTGCAT 9352 Score = 96.9 bits (106), Expect = 1e-14 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTA-GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAAT 140565 |||||||||||| | | | || |||| || ||||||||||| || || || || |||| Sbjct 8898 CATACCACCACGAAGGCGCAAGACCAAG-TGGAGAGTAGACTCCTTCTGGATGTTGTAAT 8840 Query 140566 CAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 | || | || || || || || || || || || || ||||| | ||||| || |||| Sbjct 8839 CGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAG 8780 Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 | || || ||||| || || ||||| || ||| || | || | || || | | Sbjct 8779 GGGGGATACCTTCCTTGTCTTGAATCTTCTGTTTCACGGCTTGGATGGTGTCGGAAGACT 8720 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || || | ||||| ||||| || || || || ||||| ||||| Sbjct 8719 CGACTTCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAAATTTGCAT 8668 >seq1860 Length=4765 Score = 114 bits (126), Expect = 4e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || |||||||| || ||||| || || ||||| Sbjct 1727 CATACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATC 1786 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || ||||| ||||| | ||||| || ||||| Sbjct 1787 GGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGG 1846 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || || || ||||| || ||| | || | ||| || | || Sbjct 1847 GGGGATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTC 1906 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| |||| |||||||| || | ||||| || || |||||||| Sbjct 1907 GACCTCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 1957 Score = 114 bits (126), Expect = 4e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || |||||||| || ||||| || || ||||| Sbjct 2183 CATACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATC 2242 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || ||||| ||||| | ||||| || ||||| Sbjct 2243 GGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGG 2302 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || || || ||||| || ||| | || | ||| || | || Sbjct 2303 GGGGATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTC 2362 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| |||| |||||||| || | ||||| || || |||||||| Sbjct 2363 GACCTCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 2413 Score = 111 bits (122), Expect = 5e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || |||||||| || ||||| || || ||||| Sbjct 2411 CATACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATC 2470 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || ||||| ||||| | ||||| || ||||| Sbjct 2471 GGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGG 2530 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || || || ||||| || ||| | || | ||| || | || Sbjct 2531 GGGGATGCCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTC 2590 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| |||| |||||||| || | ||||| || || || ||||| Sbjct 2591 GACCTCAAGGGTAATGGTCTTTCCCGTCAAAGTTTTCACGAAGATTTGCAT 2641 Score = 109 bits (120), Expect = 2e-18 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | | || | || |||||||| || || || || || ||||| Sbjct 1955 CATACCACCACGAAGGCGCAAGACTAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATC 2014 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || ||||| | ||| ||||| || ||||| | ||||| || ||||| Sbjct 2015 GGAAAGGGTCCGGCCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGG 2074 Query 140627 AGGAATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 ||| || ||||| || || ||||| ||| || || ||| | || | || || | | Sbjct 2075 AGGGATCCCTTCCTTGTCTTGAATCTTTTGC-TTCACAGCTTGGATGGTGTCGGAGGACT 2133 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || ||||| |||| |||||||| || | ||||| || || |||||||| Sbjct 2134 CGACCTCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 2185 >seq5736 Length=2708 Score = 109 bits (120), Expect = 2e-18 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTA-GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAAT 140565 |||||||||||| | | | || |||| || ||||||||||| || || || || |||| Sbjct 2692 CATACCACCACGAAGGCGCAAGACCAAG-TGGAGAGTAGACTCCTTCTGGATGTTGTAAT 2634 Query 140566 CAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 | || | || || ||||| || || || ||||| || ||||| | ||||| || |||| Sbjct 2633 CGGAAAGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAG 2574 Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 | || || ||||| || || || ||||| || || | || | ||| || | | Sbjct 2573 GGGGGATACCTTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATGGTATCGGAGGACT 2514 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||| || || | ||||| ||||| || || || || || |||||||| Sbjct 2513 CAACTTCGAGAGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAGATCTGCAT 2462 Score = 105 bits (116), Expect = 2e-17 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTA-GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAAT 140565 |||||||||||| | | | || |||| || ||||||||||| || || || || |||| Sbjct 2464 CATACCACCACGAAGGCGCAAGACCAAG-TGGAGAGTAGACTCCTTCTGGATGTTGTAAT 2406 Query 140566 CAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 | || | || || ||||| || || || ||||| || ||||| | ||||| || |||| Sbjct 2405 CGGAAAGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAG 2346 Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 | ||||| ||||| || || || ||||| || || | || | || || | | Sbjct 2345 GGGGAATACCTTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATGGTGTCGGAGGACT 2286 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || || | |||||||| || || ||||| || || || ||||| Sbjct 2285 CGACTTCGAGAGTGATAGTCTTTCCTGTGAGGGTTTTGACGAAGATTTGCAT 2234 >seq1856 Length=6291 Score = 109 bits (120), Expect = 2e-18 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATC-TTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAAT 140565 |||||||||||| | | ||| |||| || |||||||| || || || || || |||| Sbjct 6202 CATACCACCACGAAGGCGCAAGACCAAG-TGGAGAGTAGATTCCTTCTGGATGTTGTAAT 6144 Query 140566 CAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 | || | || || || ||||| | ||| ||||| || ||||| || ||||| || || | Sbjct 6143 CGGAAAGGGTGCGGCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGTTGTTGGTCGG 6084 Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 | ||||| ||||| || || || ||||| || ||| | || | ||| || | | Sbjct 6083 GGGGAATACCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAAGACT 6024 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || || | ||||| ||||| || ||||| || || || ||||| Sbjct 6023 CGACTTCGAGAGTGATAGTCTTACCGGTGAGGGTTTTGACGAAGATTTGCAT 5972 >seq1292 Length=4421 Score = 109 bits (120), Expect = 2e-18 Identities = 152/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||| |||| ||||||||||| || || || || || ||||| || | || || || ||| Sbjct 267 AGACCAAG-TGAAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCT 209 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || | ||| ||||| || ||||| | ||||| || ||||| || || || || || || Sbjct 208 TCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCCTCCTTGTCT 149 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || ||||| || || | || | ||||| | || || ||||| |||| |||| Sbjct 148 TGGATTTTCTGCTTCACGGCTTGGATGGTGTCAGAAGACTCGACCTCAAGGGTAATTGTC 89 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | |||||||| || |||||||| Sbjct 88 TTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 57 >seq7632 Length=1044 Score = 104 bits (114), Expect = 7e-17 Identities = 151/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||| |||| ||||||||||| || || || || || ||||| || | || || || ||| Sbjct 688 AGACCAAG-TGAAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCT 746 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || | ||| ||||| || ||||| | ||||| || ||||| || || || || || || Sbjct 747 TCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCCTCCTTGTCT 806 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || ||||| || || | || | ||||| | || || ||||| |||| |||| Sbjct 807 TGGATTTTCTGCTTCACGGCTTGGATAGTGTCAGAAGACTCGACCTCAAGGGTAATTGTC 866 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || |||||||| Sbjct 867 TTTCCCGTCAAAGTTTTCACGAAGATCTGCAT 898 >seq5144 Length=14169 Score = 100 bits (110), Expect = 9e-16 Identities = 443/694 (64%), Gaps = 8/694 (1%) Strand=Plus/Minus Query 349196 ACCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGAT 349255 |||| || || |||||||| || || || || |||||||| | | | | | || | | Sbjct 4810 ACCGTCATTGGTATCGATTTGGGAACCACCTACTCTTGTGTCGGTATCTTCAAGAAGGGT 4751 Query 349256 CGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTT 349315 ||||| || || ||||| || || | || ||| | | || || || ||||| || || Sbjct 4750 CGTGTCGAGATCATTGCCAACGACCTTGGAAACCGCATTACCCCCTCTTACGTCGCTTTC 4691 Query 349316 ACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAA 349375 | ||| || ||| |||||||||| ||||| || || || || | ||| || | Sbjct 4690 AACGACCAAGAACGTTTGATTGGTGAGTCTGCCAAGAACCAGGCCACCCTTAACCCCGAG 4631 Query 349376 AATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAA 349435 || || | ||||| ||||| | || ||| | |||||||| || ||| Sbjct 4630 AACACCCTCTTTGACATCAAGCGTTTGATCGGTCGCGACTTTTCTGATGCCACTGTGCAA 4571 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 || ||| | || || || || | | || | | |||| | || | |||| | Sbjct 4570 TCCGATATGAAGTTGTTGCCCTTCAAGATCGT-CAACAAGAACG-GAAAGCCCAACG--T 4515 Query 349496 GAG-GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 | | || || || || || |||| ||| ||||| || || || | ||||| Sbjct 4514 GCGTGTCCAAGTCAAGGGAGAGGAAAAGGTCTTTGCTCCCGAGGAGATCTCCGCCATGGT 4455 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | || |||||||| ||||| || | || | ||| | | || | ||||| Sbjct 4454 CCTCACCAAGATGAAGGACATTGCCGAGTCTTACATTGGTAAGCCCGTCCAGGCCGCTGT 4395 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || ||||| || ||||| || || ||||| ||||| || || || |||||||| Sbjct 4394 CATCACTGTCCCTGCCTACTTCAACGATGCTCAGCGCCAGGCCACCAAGGATGCTGGTGC 4335 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 |||||| || || || || | | || || || || ||||| ||||| || ||||| || Sbjct 4334 CATTGCTGGATTGAACGTGTTGCGTATCATCAACGAGCCCACCGCTGCCGCCATTGCCTA 4275 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 ||| | || || || |||||||| || || || | | | ||||| || ||||| Sbjct 4274 CGGGTTCGACCAA--GAA-GACCAAGAGAAGAACATCATGGTCTACGATTTGGGAGGTGG 4218 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 || |||||||| || | | || | || || | ||||| || | || || Sbjct 4217 AACCTTTGATGTCTCCATCTTGACCATCGACTCTGGTGTCTTTGAGGTGTTGTCCACCGC 4158 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 || || || || | || ||||||||||| ||| Sbjct 4157 CGGAGACACTCACTTGGGAGGAGAAGATTTCGAT 4124 >seq6462 Length=11053 Score = 84.2 bits (92), Expect = 7e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 140553 TGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGA 140612 |||||||| |||||| | | | ||||||||| || |||| ||| |||| |||| Sbjct 7130 TGAATATTGTAATCAAACAGGTCTTTCCCATCTTCGAGCTGTTGGCCACCAAAAATTAAG 7189 Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTT 140653 ||||||||||| || ||||| |||||||| || |||||||| Sbjct 7190 CGTTGCTGATCGGGCGGAATCCCTTCTTTGTCTTGAATTTT 7230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515073284956187