Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1860 158 1e-33 seq2450 149 5e-31 seq2282 149 5e-31 seq1856 149 5e-31 seq6235 145 7e-30 seq1292 145 7e-30 seq7632 140 3e-28 seq5736 131 1e-25 seq147 111 1e-19 seq6462 82.4 7e-11 >seq1860 Length=4765 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||| |||| || ||| ||||||| ||||| || || | ||| Sbjct 2185 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCCTCC 2126 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || | || || ||||| ||||||||||| ||||| || || || || ||| Sbjct 2125 GACACCATCCAAGCTGTGAAGCAAAAGATTCAAGACAAGGAAGGGATCCCTCCTGACCAA 2066 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | |||||| || |||||||||||| | |||| |||||||||||||| Sbjct 2065 CAACGATTGATCTTCGCCGGAAAGCAATTGGAAGACGGCCGGACCCTTTCCGATTACAAC 2006 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | || || || ||||| | || ||||| || Sbjct 2005 ATCCAGAAGGAATCTACTCTCCACTTAGTCTTGCGCCTTCGTGGTGGTAT 1956 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||| |||| || ||| ||||||| ||||| || || | ||| Sbjct 1729 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCCTCC 1670 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || | || || || ||||| |||||||| |||||||| || || || ||| Sbjct 1669 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGACCAA 1610 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| ||||| || | || || || || |||||||||||||| Sbjct 1609 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 1550 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || |||||||| || || | || ||||| ||||| | || ||||| Sbjct 1549 ATCCAAAAGGAATCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGG 1503 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||| |||| || ||| | ||||| ||||| || || | ||| Sbjct 1957 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACCATTACCCTTGAGGTCGAGTCCTCC 1898 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || | || || || ||||| |||||||| |||||||| || || || ||| Sbjct 1897 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGACCAA 1838 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| ||||| || | || || || || |||||||||||||| Sbjct 1837 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 1778 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | || ||||| | ||| | || ||||| || Sbjct 1777 ATCCAAAAGGAATCTACTCTCCACTTGGTCCTCCGTCTTCGTGGTGGTAT 1728 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||| |||| || ||| | ||||| ||||| || || | ||| Sbjct 2413 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACCATTACCCTTGAGGTCGAGTCCTCC 2354 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || | || || || ||||| |||||||| |||||||| || || || ||| Sbjct 2353 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGACCAA 2294 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| ||||| || | || || || || |||||||||||||| Sbjct 2293 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 2234 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | || ||||| | ||| | || ||||| || Sbjct 2233 ATCCAAAAGGAATCTACTCTCCACTTGGTCCTCCGTCTTCGTGGTGGTAT 2184 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || |||||| |||| || ||| | ||||| ||||| || || | || Sbjct 2642 CATGCAAATCTTCGTGAAAACTTTGACGGGAAAGACCATTACCCTTGAGGTCGAGTCCTC 2583 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || | || || || ||||| |||||||| |||||||| || || || || Sbjct 2582 CGATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGACCA 2523 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| || || || | ||| ||||| || | || || || || ||||||||||||| Sbjct 2522 ACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAA 2463 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| |||||||| || || | || ||||| | ||| | || ||||| || Sbjct 2462 CATCCAAAAGGAATCTACTCTCCACTTGGTCCTCCGTCTTCGTGGTGGTAT 2412 >seq2450 Length=27238 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||| |||| || ||| | ||||| ||||| || || | ||| Sbjct 8896 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGTCCTCC 8955 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || | ||||| ||||||||||||||||| ||||| || || || || ||| Sbjct 8956 GACACCATCCAAGCCGTCAAGCAAAAAATTCAAGACAAGGAAGGTATTCCCCCTGACCAA 9015 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| ||||| || | || ||| || || |||||||||||||| Sbjct 9016 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 9075 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || ||||| ||||| | || ||||| || Sbjct 9076 ATCCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGTAT 9125 Score = 143 bits (158), Expect = 2e-29 Identities = 171/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 ||||||| || || || || || || ||||| ||| |||| ||||| ||||| || | | Sbjct 8666 CCATGCAAATTTTCGTCAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTCGAGTCTT 8725 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||||| | || | || ||||| || ||||||||||| ||||| || || || || | Sbjct 8726 CCGACACCATCCAAGCCGTGAAACAGAAGATTCAAGACAAGGAAGGTATCCCCCCTGACC 8785 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 |||| || || || | ||||||||| || | || ||| || || |||||||||||| Sbjct 8786 AACAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACA 8845 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| || |||||||| || | || ||||| ||||| | || ||||| || Sbjct 8846 ACATCCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGTAT 8897 Score = 140 bits (154), Expect = 3e-28 Identities = 170/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| || ||||||||| |||| || ||| | ||||| || || || || | | Sbjct 7210 CCATGCAGATTTTCGTAAAAACTTTGACGGGAAAGACAATTACCCTGGAGGTCGAGTCTT 7269 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 | ||| | || | ||||| ||||||||||||||||| ||||| || || || || | Sbjct 7270 CTGACACCATCCAAGCCGTCAAGCAAAAAATTCAAGACAAGGAAGGTATTCCCCCTGACC 7329 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 |||| || || || | ||| ||||| || | || ||| || || |||||||||||| Sbjct 7330 AACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACA 7389 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| || ||||| || || | || ||||| | ||| | || ||||| || Sbjct 7390 ACATCCAGAAGGAATCTACTCTCCACTTGGTCCTCCGTCTTCGTGGTGGTAT 7441 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || ||||||||| |||| || ||| ||||||| ||||| || || | ||| Sbjct 7440 ATGCAAATTTTCGTAAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCCTCC 7499 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || | || ||||| ||||| |||||||| ||||| || || || || ||| Sbjct 7500 GACACCATCCAAGCCGTGAAACAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 7559 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | |||||| || || | || || || ||| |||||||||||||| Sbjct 7560 CAACGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTTTCCGATTACAAC 7619 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | || ||||| | ||| | || ||||| || Sbjct 7620 ATCCAAAAGGAATCTACTCTCCACTTGGTCCTCCGTCTTCGTGGTGGTAT 7669 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| |||| || ||| ||||||| ||||| || || | || Sbjct 7668 ATGCAAATTTTCGTGAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCTTCT 7727 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || | ||||| ||||| ||||||||||| ||||| || || || || ||| Sbjct 7728 GACACCATCCAAGCCGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAA 7787 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||||||||| || | || ||| || || |||||||||||||| Sbjct 7788 CAACGATTGATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCCGATTACAAC 7847 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || |||||||| ||||| | || ||||| | ||| | || || || Sbjct 7848 ATCCAAAAGGAATCGACTCTCCACTTGGTCCTCCGTCTTCGTGGAGG 7894 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||| ||| |||| ||||| ||||| || | ||| Sbjct 9124 ATGCAGATCTTCGTCAAGACCCTCACCGGTAAGACTATCACTCTCGAAGTTGAGTCCTCC 9183 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || | || ||||| || ||||||||||| ||||| || || || || ||| Sbjct 9184 GATACCATCCAAGCCGTGAAACAGAAGATTCAAGACAAGGAAGGTATCCCCCCTGACCAA 9243 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| ||||| || | || ||| || || |||||||||||||| Sbjct 9244 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 9303 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || ||||| ||||| | || ||||| || Sbjct 9304 ATCCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGTAT 9353 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || ||||| ||| |||| ||||| ||||| || | ||| Sbjct 9352 ATGCAGATCTTCGTCAAAACGCTCACCGGTAAGACTATCACTCTCGAAGTCGAGTCCTCC 9411 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || | || || || ||||| |||||||| ||||| || || || || ||| Sbjct 9412 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 9471 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| ||||| || | || ||| || || |||||||||||||| Sbjct 9472 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 9531 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 || || ||||| || || | || ||||| ||||| Sbjct 9532 ATCCAGAAGGAATCTACTCTTCACTTGGTCTTGCG 9566 >seq2282 Length=5406 Score = 149 bits (164), Expect = 5e-31 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| |||||||||||| |||| || ||| | ||||| ||||| || || | | Sbjct 395 CCATGCAGATCTTTGTAAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGTCCT 336 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||||| | || | || ||||| ||||| |||||||| ||||| || || || || | Sbjct 335 CCGACACCATCCAAGCCGTGAAACAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACC 276 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 |||| || || || | ||| ||||| || | || || || || |||||||||||| Sbjct 275 AACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACA 216 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| |||||||| || || | || ||||| ||||| | || ||||| || Sbjct 215 ACATCCAAAAGGAATCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGTAT 164 >seq1856 Length=6291 Score = 149 bits (164), Expect = 5e-31 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 ||||||| || || || ||||| || ||||| ||| |||| ||||| ||||| || | | Sbjct 5970 CCATGCAAATCTTCGTCAAAACCCTCACCGGTAAGACTATCACTCTCGAAGTCGAGTCTT 6029 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 |||| | || | || || || ||||| |||||||| ||||| || || ||||| | Sbjct 6030 CCGATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGTATTCCCCCCGACC 6089 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 |||| || | || | |||||| || |||||||||||| | ||| |||||||||||| Sbjct 6090 AACAACGCCTCATCTTCGCCGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGATTACA 6149 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| || ||||| || || | || ||||| ||||| | || ||||| || Sbjct 6150 ACATCCAGAAGGAATCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGTAT 6201 >seq6235 Length=3334 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || ||||| ||| |||| ||||| ||||| ||| | ||| Sbjct 976 ATGCAGATCTTTGTCAAGACCCTCACCGGTAAGACTATCACTCTCGAAGTCGAATCCTCC 1035 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || | || || ||||| ||||||||||| ||||| || || || || ||| Sbjct 1036 GACACCATCCAAGCTGTGAAGCAAAAGATTCAAGACAAGGAAGGTATCCCCCCTGACCAA 1095 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||||||||| || | || || | ||| |||||||||||||| Sbjct 1096 CAACGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGGCGCACCCTTTCCGATTACAAC 1155 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | || ||||| ||||| | || ||||| || Sbjct 1156 ATCCAAAAGGAATCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGTAT 1205 Score = 140 bits (154), Expect = 3e-28 Identities = 170/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| ||||| ||||| ||||| |||||| | || ||||| || || || | | Sbjct 746 CCATGCAGATCTTTGTCAAAACCCTGACTGGCAAGACCATCACTCTCGAGGTCGAGTCTT 805 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||||| | || | || || ||||| || |||||||| ||||| || || || || | Sbjct 806 CCGACACCATCCAAGCTGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCTCCTGACC 865 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 |||| || || || | |||||| || || | || ||| || ||| |||| ||||||| Sbjct 866 AACAACGATTGATCTTCGCCGGGAAGCAGCTCGAGGACGGTCGCACCCTTTCTGATTACA 925 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| || ||||| || || | || ||||| ||||| | || ||||| || Sbjct 926 ACATCCAGAAGGAATCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGTAT 977 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||||||| |||| || ||| | ||||| ||||| || || | ||| Sbjct 1204 ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACGATTACCCTTGAGGTCGAGTCCTCC 1263 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || | || || ||||| || |||||||| ||||| || || || || ||| Sbjct 1264 GACACCATCCAAGCCGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 1323 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| || || || | || ||| || || |||||||||||||| Sbjct 1324 CAACGATTGATCTTCGCGGGAAAGCAGCTTGAGGACGGTCGCACTCTTTCCGATTACAAC 1383 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | || ||||| | ||| | || ||||| || Sbjct 1384 ATCCAGAAGGAATCTACTCTCCACTTGGTCCTCCGTCTTCGTGGTGGTAT 1433 Score = 96.9 bits (106), Expect = 3e-15 Identities = 128/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| |||| || ||| | |||||||| ||||| || | ||| Sbjct 1432 ATGCAAATTTTCGTGAAAACTTTGACGGGAAAGACGATTACTCTCGAAGTCGAGTCCTCC 1491 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || | || || ||||| ||||||||||| ||||| || || || || ||| Sbjct 1492 GATACCATCCAAGCTGTGAAGCAAAAGATTCAAGACAAGGAAGGAATCCCTCCTGACCAA 1551 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 || || || || | ||| ||||| || | || || || || |||||||||||| Sbjct 1552 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACA 1609 >seq1292 Length=4421 Score = 145 bits (160), Expect = 7e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||||||| |||| || ||| | ||||| ||||| || || | || Sbjct 57 ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGTCTTCT 116 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || | || || || ||||| |||||||| || ||||| || || || ||| Sbjct 117 GACACCATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCAA 176 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | |||||| || |||||||||||| || || |||||||||||||| Sbjct 177 CAACGATTGATCTTCGCCGGAAAGCAATTGGAAGACGGTCGCACTCTTTCCGATTACAAC 236 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 || || ||||| || || | || ||||| ||||| Sbjct 237 ATCCAGAAGGAATCTACTCTTCACTTGGTCTTGCG 271 >seq7632 Length=1044 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||| |||| || ||| | ||||| ||||| || || | || Sbjct 898 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGTCTTCT 839 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || | || || || ||||| |||||||| || ||||| || || || ||| Sbjct 838 GACACTATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCAA 779 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | |||||| || |||||||||||| || || |||||||||||||| Sbjct 778 CAACGATTGATCTTCGCCGGAAAGCAATTGGAAGACGGTCGCACTCTTTCCGATTACAAC 719 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 || || ||||| || || | || ||||| ||||| Sbjct 718 ATCCAGAAGGAATCTACTCTTCACTTGGTCTTGCG 684 >seq5736 Length=2708 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 ||||||| || || || ||||| || || || ||| |||| ||||| ||||| || | | Sbjct 2232 CCATGCAAATCTTCGTCAAAACCCTCACAGGAAAGACTATCACTCTCGAAGTCGAGTCCT 2291 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||||| | || | || || || ||||| |||||||| ||||| || || || || | Sbjct 2292 CCGACACCATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAAGGTATTCCCCCTGACC 2351 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 |||| || || || | |||||| || || | || || || || |||||||||||| Sbjct 2352 AACAACGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACA 2411 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| || |||||||| || | || ||||| ||||| | || ||||| || Sbjct 2412 ACATCCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGTAT 2463 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||| ||| |||| ||||| ||||| || | ||| Sbjct 2462 ATGCAGATCTTCGTCAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTTGAGTCCTCC 2521 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || | || || || ||||| |||||||| ||||| || || || || ||| Sbjct 2522 GATACCATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 2581 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | |||||| || || | || || || || |||||||||||||| Sbjct 2582 CAACGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 2641 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || ||||| ||||| | || ||||| || Sbjct 2642 ATCCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGTAT 2691 >seq147 Length=786 Score = 111 bits (122), Expect = 1e-19 Identities = 135/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 ||||||| || || || || || || ||||| ||| |||| ||||| ||||| || | | Sbjct 186 CCATGCAAATTTTCGTCAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTCGAGTCTT 127 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||||| | || | || ||||| || ||||||||||| ||||| || || || || | Sbjct 126 CCGACACCATCCAAGCCGTGAAACAGAAGATTCAAGACAAGGAAGGTATTCCCCCTGACC 67 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 |||| || || || | ||| ||||| || | || ||| || || |||||||||||| Sbjct 66 AACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACA 7 Query 27166 ACAT 27169 |||| Sbjct 6 ACAT 3 >seq6462 Length=11053 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/121 (77%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 27054 ATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGT 27113 ||| ||| ||||||||||||||||||||||||||||| || || |||||||| || || Sbjct 7248 ATTCAGACAGTCAAACAAAAAATTCAAGACAAAGAAGGGATTCCGCCCGATCAGCAACGC 7189 Query 27114 TTAATATACGCCGGCAAACAATTGGAAGA-CAGTTCGACC-GTTTCCGATTACAACATTC 27171 ||||| | | ||| |||| | ||||| | |||| |||| |||||||| |||| Sbjct 7188 TTAATTTTTGGTGGCCAACAGCTCGAAGATGGGAAAGACCTGTTT--GATTACAATATTC 7131 Query 27172 A 27172 | Sbjct 7130 A 7130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434867683078080