Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2450 125 5e-24 seq5736 122 6e-23 seq6235 113 3e-20 seq147 113 3e-20 seq2282 109 4e-19 seq1856 107 1e-18 seq1860 104 2e-17 seq7632 100 2e-16 seq1292 96.9 2e-15 >seq2450 Length=27238 Score = 125 bits (138), Expect = 5e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || |||||||| || || || |||||||||||||| || || | Sbjct 8668 ATGCAAATTTTCGTCAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTCGAGTCTTCC 8727 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | ||||| || ||| ||||| |||||| | || || || ||| Sbjct 8728 GACACCATCCAAGCCGTGAAACAGAAGATTCAAGACAAGGAAGGTATCCCCCCTGACCAA 8787 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || |||||||| || || || |||| |||||| | |||||||||| Sbjct 8788 CAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 8847 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 8848 ATCCAGAAGGAGTCTAC 8864 Score = 125 bits (138), Expect = 5e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||||||||||||||| ||| | Sbjct 9124 ATGCAGATCTTCGTCAAGACCCTCACCGGTAAGACTATCACTCTCGAAGTTGAGTCCTCC 9183 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | ||||| || ||| ||||| |||||| | || || || ||| Sbjct 9184 GATACCATCCAAGCCGTGAAACAGAAGATTCAAGACAAGGAAGGTATCCCCCCTGACCAA 9243 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || || ||||| || || || |||| |||||| | |||||||||| Sbjct 9244 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 9303 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 9304 ATCCAGAAGGAGTCTAC 9320 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| ||||| || || || |||||||||||||| || ||| | Sbjct 9352 ATGCAGATCTTCGTCAAAACGCTCACCGGTAAGACTATCACTCTCGAAGTCGAGTCCTCC 9411 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | || || ||||| ||||| |||||| | || || || ||| Sbjct 9412 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 9471 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || || ||||| || || || |||| |||||| | |||||||||| Sbjct 9472 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 9531 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || || || || | || || || || | | || |||||| Sbjct 9532 ATCCAGAAGGAATCTACTCTTCACTTGGTCTTGCGCCTTCGTGGAGGA 9579 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| | |||||||| || || || || || || || ||| | Sbjct 8896 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGTCCTCC 8955 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | || ||||||||| ||||| |||||| | || || || ||| Sbjct 8956 GACACCATCCAAGCCGTCAAGCAAAAAATTCAAGACAAGGAAGGTATTCCCCCTGACCAA 9015 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || || ||||| || || || |||| |||||| | |||||||||| Sbjct 9016 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 9075 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 9076 ATCCAGAAGGAGTCTAC 9092 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||| | |||||||| || || || || || || || || | Sbjct 7212 ATGCAGATTTTCGTAAAAACTTTGACGGGAAAGACAATTACCCTGGAGGTCGAGTCTTCT 7271 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | || ||||||||| ||||| |||||| | || || || ||| Sbjct 7272 GACACCATCCAAGCCGTCAAGCAAAAAATTCAAGACAAGGAAGGTATTCCCCCTGACCAA 7331 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || || ||||| || || || |||| |||||| | |||||||||| Sbjct 7332 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 7391 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 7392 ATCCAGAAGGAATCTAC 7408 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||| | |||||||| || || || || || || || || | Sbjct 7668 ATGCAAATTTTCGTGAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCTTCT 7727 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | || ||||| ||| ||||| |||||| | || || || ||| Sbjct 7728 GACACCATCCAAGCCGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAA 7787 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || |||||||| || || || |||| |||||| | |||||||||| Sbjct 7788 CAACGATTGATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCCGATTACAAC 7847 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| || || || Sbjct 7848 ATCCAAAAGGAATCGAC 7864 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||| | |||||||| || || || || || || || ||| | Sbjct 7440 ATGCAAATTTTCGTAAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCCTCC 7499 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | ||||| ||||| ||||| |||||| | || || || ||| Sbjct 7500 GACACCATCCAAGCCGTGAAACAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 7559 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || ||||| || || || || || | ||||| | |||||||||| Sbjct 7560 CAACGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTTTCCGATTACAAC 7619 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| || || || Sbjct 7620 ATCCAAAAGGAATCTAC 7636 >seq5736 Length=2708 Score = 122 bits (134), Expect = 6e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| ||||||||||| ||||| || |||||||||||||| || ||| | Sbjct 2234 ATGCAAATCTTCGTCAAAACCCTCACAGGAAAGACTATCACTCTCGAAGTCGAGTCCTCC 2293 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | || || ||||| ||||| |||||| | || || || ||| Sbjct 2294 GACACCATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAAGGTATTCCCCCTGACCAA 2353 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || ||||| || || || || || | |||||| | |||||||||| Sbjct 2354 CAACGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 2413 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 2414 ATCCAGAAGGAGTCTAC 2430 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||||||||||||||| ||| | Sbjct 2462 ATGCAGATCTTCGTCAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTTGAGTCCTCC 2521 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | || || ||||| ||||| |||||| | || || || ||| Sbjct 2522 GATACCATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 2581 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || ||||| || || || || || | |||||| | |||||||||| Sbjct 2582 CAACGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 2641 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 2642 ATCCAGAAGGAGTCTAC 2658 >seq6235 Length=3334 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || |||||||||||||| || ||| | Sbjct 976 ATGCAGATCTTTGTCAAGACCCTCACCGGTAAGACTATCACTCTCGAAGTCGAATCCTCC 1035 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | || ||||| ||| ||||| |||||| | || || || ||| Sbjct 1036 GACACCATCCAAGCTGTGAAGCAAAAGATTCAAGACAAGGAAGGTATCCCCCCTGACCAA 1095 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || | || || |||||||| || || || || | ||||| | |||||||||| Sbjct 1096 CAACGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGGCGCACCCTTTCCGATTACAAC 1155 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| || || || Sbjct 1156 ATCCAAAAGGAATCTAC 1172 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| | |||||||| ||||| || || || || || ||| | Sbjct 1204 ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACGATTACCCTTGAGGTCGAGTCCTCC 1263 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | || ||||| || ||||| |||||| | || || || ||| Sbjct 1264 GACACCATCCAAGCCGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 1323 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || || || || || || || |||| |||||| | |||||||||| Sbjct 1324 CAACGATTGATCTTCGCGGGAAAGCAGCTTGAGGACGGTCGCACTCTTTCCGATTACAAC 1383 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 1384 ATCCAGAAGGAATCTAC 1400 Score = 96.9 bits (106), Expect = 2e-15 Identities = 128/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||| | |||||||| ||||| ||||||||||| || ||| | Sbjct 1432 ATGCAAATTTTCGTGAAAACTTTGACGGGAAAGACGATTACTCTCGAAGTCGAGTCCTCC 1491 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | || ||||| ||| ||||| ||||| | || || || ||| Sbjct 1492 GATACCATCCAAGCTGTGAAGCAAAAGATTCAAGACAAGGAAGGAATCCCTCCTGACCAA 1551 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 || || || || || || ||||| || || || || | |||||| | |||||||| Sbjct 1552 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACA 1609 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || |||||||| || || || || ||||||||||| || || || | Sbjct 748 ATGCAGATCTTTGTCAAAACCCTGACTGGCAAGACCATCACTCTCGAGGTCGAGTCTTCC 807 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | || ||||| || ||||| |||||| | || || || ||| Sbjct 808 GACACCATCCAAGCTGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCAA 867 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || ||||| || || || || |||| ||||| | ||||||||| Sbjct 868 CAACGATTGATCTTCGCCGGGAAGCAGCTCGAGGACGGTCGCACCCTTTCTGATTACAAC 927 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 928 ATCCAGAAGGAATCTAC 944 >seq147 Length=786 Score = 113 bits (124), Expect = 3e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || |||||||| || || || |||||||||||||| || || | Sbjct 184 ATGCAAATTTTCGTCAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTCGAGTCTTCC 125 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | ||||| || ||| ||||| |||||| | || || || ||| Sbjct 124 GACACCATCCAAGCCGTGAAACAGAAGATTCAAGACAAGGAAGGTATTCCCCCTGACCAA 65 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || || ||||| || || || |||| |||||| | |||||||||| Sbjct 64 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 5 Query 23791 AT 23792 || Sbjct 4 AT 3 >seq2282 Length=5406 Score = 109 bits (120), Expect = 4e-19 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| | |||||||| ||||||||||||||||| || || | Sbjct 165 ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACGATCACTCTCGAAGTCGAGTCTTCC 106 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | ||||| ||||| ||||| |||||| | || || || ||| Sbjct 105 GACACCATCCAAGCTGTGAAACAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 46 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACT 23775 || || || || || |||||||| || || || |||| |||||| Sbjct 45 CAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACT 1 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| | |||||||| || || || || || || || ||| | Sbjct 393 ATGCAGATCTTTGTAAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGTCCTCC 334 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | ||||| ||||| ||||| |||||| | || || || ||| Sbjct 333 GACACCATCCAAGCCGTGAAACAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 274 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || || ||||| || || || || | |||||| | |||||||||| Sbjct 273 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 214 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| || || || Sbjct 213 ATCCAAAAGGAATCTAC 197 >seq1856 Length=6291 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| ||||||||||| || || || |||||||||||||| || || | Sbjct 5972 ATGCAAATCTTCGTCAAAACCCTCACCGGTAAGACTATCACTCTCGAAGTCGAGTCTTCC 6031 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | || || ||||| ||||| |||||| | || || || ||| Sbjct 6032 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGTATTCCCCCCGACCAA 6091 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || | || || ||||| || ||| ||||||||| ||||| | |||||||||| Sbjct 6092 CAACGCCTCATCTTCGCCGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGATTACAAC 6151 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 6152 ATCCAGAAGGAATCTAC 6168 >seq1860 Length=4765 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| | |||||||| || || || || || || || ||| | Sbjct 2185 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCCTCC 2126 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | || ||||| ||| ||||| ||||| | || || || ||| Sbjct 2125 GACACCATCCAAGCTGTGAAGCAAAAGATTCAAGACAAGGAAGGGATCCCTCCTGACCAA 2066 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || ||||| || ||| ||||||||| || || | |||||||||| Sbjct 2065 CAACGATTGATCTTCGCCGGAAAGCAATTGGAAGACGGCCGGACCCTTTCCGATTACAAC 2006 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || || || || || || | || ||||| || Sbjct 2005 ATCCAGAAGGAATCTACTCTCCACTTAGTCTT 1974 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| | |||||||| || || || || || || || ||| | Sbjct 1729 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCCTCC 1670 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | || || ||||| ||||| ||||| | || || || ||| Sbjct 1669 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGACCAA 1610 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || || ||||| || || || || | |||||| | |||||||||| Sbjct 1609 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 1550 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| || || || Sbjct 1549 ATCCAAAAGGAATCTAC 1533 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| | |||||||| || || || || || || || ||| | Sbjct 1957 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACCATTACCCTTGAGGTCGAGTCCTCC 1898 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | || || ||||| ||||| ||||| | || || || ||| Sbjct 1897 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGACCAA 1838 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || || ||||| || || || || | |||||| | |||||||||| Sbjct 1837 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 1778 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| || || || Sbjct 1777 ATCCAAAAGGAATCTAC 1761 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| | |||||||| || || || || || || || ||| | Sbjct 2413 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACCATTACCCTTGAGGTCGAGTCCTCC 2354 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | || || ||||| ||||| ||||| | || || || ||| Sbjct 2353 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGACCAA 2294 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || || ||||| || || || || | |||||| | |||||||||| Sbjct 2293 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 2234 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| || || || Sbjct 2233 ATCCAAAAGGAATCTAC 2217 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||| || ||||| ||||| | |||||||| || || || || || || || ||| Sbjct 2644 AACATGCAAATCTTCGTGAAAACTTTGACGGGAAAGACCATTACCCTTGAGGTCGAGTCC 2585 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || | || | || || ||||| ||||| ||||| | || || || Sbjct 2584 TCCGATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGAC 2525 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||| || || || || || ||||| || || || || | |||||| | ||||||| Sbjct 2524 CAACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTAC 2465 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| ||||| || || || Sbjct 2464 AACATCCAAAAGGAATCTAC 2445 >seq7632 Length=1044 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| | |||||||| || || || || || || || || | Sbjct 898 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGTCTTCT 839 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | || || ||||| ||||| || || | || || || ||| Sbjct 838 GACACTATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCAA 779 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || ||||| || ||| ||||||||| |||||| | |||||||||| Sbjct 778 CAACGATTGATCTTCGCCGGAAAGCAATTGGAAGACGGTCGCACTCTTTCCGATTACAAC 719 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || || || || | || || || || | | || |||||| Sbjct 718 ATCCAGAAGGAATCTACTCTTCACTTGGTCTTGCGCCTTCGTGGAGGA 671 >seq1292 Length=4421 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| | |||||||| || || || || || || || || | Sbjct 57 ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGTCTTCT 116 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | || || ||||| ||||| || || | || || || ||| Sbjct 117 GACACCATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCAA 176 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || || ||||| || ||| ||||||||| |||||| | |||||||||| Sbjct 177 CAACGATTGATCTTCGCCGGAAAGCAATTGGAAGACGGTCGCACTCTTTCCGATTACAAC 236 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || || || || | || || || || | | || |||||| Sbjct 237 ATCCAGAAGGAATCTACTCTTCACTTGGTCTTGCGCCTTCGTGGAGGA 284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337971169259132