Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30]
69,687 sequences; 205,175,886 total letters
Query= AC_000006.1
Length=35100
Score E
Sequences producing significant alignments: (Bits) Value
seq61051 237 4e-58
>seq61051
Length=235
Score = 237 bits (262), Expect = 4e-58
Identities = 202/242 (83%), Gaps = 8/242 (3%)
Strand=Plus/Plus
Query 6000 TCCATCTGGTCAGAAAAGACTAtttttttATTGTCAAGCTTGGTGGCAAAGGAGCCATAG 6059
|||||||||||||||||||| || |||| ||||||||||||||||||| || || |||
Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58
Query 6060 AGGGCGTTGGAGAGAAGCTTGGCGATGGATCTCATGGTCTGATTTTTGTCACGGTCGGCG 6119
||||||||||| || | |||||||||||| | || ||| || |||| | || ||||||
Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTT--GCGCGATCGGCG 116
Query 6120 CGCTCCTTGGCCGCGATGTTGAGCTGGACATATTCGCGCGCGACACACTTCCATTCGGGA 6179
|||||||||||||||||||| ||||| || ||||||||||| || ||| ||||||||||
Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGA 175
Query 6180 AAGACGGTGGTGCGCTCGTCGGGCACGATCCTGACGCGCCAGCCGCGGTTATGCAGGGTG 6239
||| |||||||||||||| ||||||| | |||||||| ||| || | |||||||||
Sbjct 176 AAG-CGGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCAACCGAGG-TGTGCAGGGTG 232
Query 6240 AC 6241
||
Sbjct 233 AC 234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 112105552107428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |