Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= AC_000011.1 Length=36519 Score E Sequences producing significant alignments: (Bits) Value seq61051 215 1e-51 >seq61051 Length=235 Score = 215 bits (238), Expect = 1e-51 Identities = 175/206 (85%), Gaps = 7/206 (3%) Strand=Plus/Plus Query 6087 TCCATCTGGTCAGAAAAGACGATCTTTTTGTTGTCGAGCTTGGTGGCGAAGGAGCCGTAG 6146 |||||||||||||||||||| ||||||| |||| ||||||||||| || || |||||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 6147 AGGGCGTTGGAGAGGAGCTTGGCGATGGAGCGCATGGTCTGGtttttttCCTTGTCGGCG 6206 ||||||||||| || | ||||||||||||||||| ||| ||| |||| | |||||| Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGG--TTTTGCGCGATCGGCG 116 Query 6207 CGCTCCTTGGCGGCGATGTTGAGCTGCACGTACTCGCGCGCCACGCACTTCCATTCGGGG 6266 ||||||||||| |||||||| ||||||||||| |||||||| |||||| ||||||||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGA 175 Query 6267 AAGACGGTGGTCAGCTCGTCGGGCAC 6292 ||| ||||||| ||||| ||||||| Sbjct 176 AAG-CGGTGGTGCGCTCG-CGGGCAC 199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116642594445014