Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= AC_000018.1 Length=35514 Score E Sequences producing significant alignments: (Bits) Value seq61051 172 1e-38 >seq61051 Length=235 Score = 172 bits (190), Expect = 1e-38 Identities = 151/183 (83%), Gaps = 5/183 (3%) Strand=Plus/Plus Query 6062 TCCATCTGGTCAGAAAACACAATCTTCTTGTTGTCCAGCTTGGTAGCAAATGATCCATAG 6121 ||||||||||||||||| |||||||| |||| ||| |||||||| ||||| || || ||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTT-TTGT-GTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 6122 AGGGCATTGGATAGAAGCTTGGCGATGGAGCGCATGGTTTGGTTCTTTTCCTTGTCCGCG 6181 ||||| ||||| || | ||||||||||||||||| |||||||| ||| | || ||| Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGT--TTTGCGCGATCGGCG 116 Query 6182 CGCTCCTTGGCGGCGATGTTAAGCTGGACGTACTCGCGCGCCACACATTTCCATTCAGGG 6241 ||||||||||| |||||||| ||||| ||||| |||||||| || || |||||| || Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGA 175 Query 6242 AAG 6244 ||| Sbjct 176 AAG 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113429255791544