Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= AC_000189.1 Length=34094 Score E Sequences producing significant alignments: (Bits) Value seq61051 132 1e-26 >seq61051 Length=235 Score = 132 bits (146), Expect = 1e-26 Identities = 147/188 (78%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 6295 CCGTAGAGGGCGTTGGAGAGAAGCTTGGCGATGCTGCGGAGCGTTTGGTTTCTGTCCCGG 6354 ||||||||||||||||| || | |||||||||| ||| || ||||||||| || | || Sbjct 53 CCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTT-TG-CGCGA 110 Query 6355 TCGGCCTTTTCCTTGGCAGCGATGTTGAGCTGCACGTAGTCTCGGGCGAGGCAGCGCCAC 6414 ||||| |||||||| |||||||| ||||||||||| || || || | ||| ||||| Sbjct 111 TCGGCGCGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCAT 169 Query 6415 TCGGGGAAGATGCTGTTGCGCTCGTCCGGCAGGAGGCGCACGGCCCAGCCACGGTTGTGG 6474 ||||| ||| | || |||||||| | |||| ||| ||||| ||| || || |||| Sbjct 170 TCGGGAAAG-CGGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCAACCGAGG-TGTGC 226 Query 6475 AGGGTGAC 6482 |||||||| Sbjct 227 AGGGTGAC 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108889016102064