Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1429 93.3 4e-14 >seq1429 Length=23345 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/131 (77%), Gaps = 6/131 (5%) Strand=Plus/Minus Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 || ||||| || ||||| ||||| || || |||||||| ||||| |||||||| | || Sbjct 7476 TCGGAGTGAATATTCTCAATGGCGATTTGGAATCCATAAAAGCAGCGAGCCTCAGGGATC 7417 Query 16562 TGTACTTC---CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCA 16618 |||||||| || | ||| ||| || |||||||||||||| || || ||||| ||| Sbjct 7416 TGTACTTCTTGCATG-AAACGAGTT--GCAAGGTTCTCATTCACAATTCCATCACTGGCA 7360 Query 16619 GCAAAAAACGC 16629 ||||| || || Sbjct 7359 GCAAAGAAAGC 7349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510968913308840