Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_001460.1 Length=34125 Score E Sequences producing significant alignments: (Bits) Value seq61051 114 3e-21 >seq61051 Length=235 Score = 114 bits (126), Expect = 3e-21 Identities = 147/198 (74%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 5959 TCCATTTGATCAGAAAAAACTAtttttttGTTATCTAGTTTGGTAGCAAAAGATCCGTAC 6018 ||||| || |||||||| || || |||| | || || ||||| ||||| || ||||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 6019 AAGGCATTGGAAAGCAGCTTGGCTATAGATCTTAGGGTTTGATTTTTGTCCCTATCGGCC 6078 | ||| ||||| |||| |||||| || || | |||||||| |||| | | |||||| Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTTG--CGCGATCGGCG 116 Query 6079 CGTTCTTTTGCGGCAATATTGAGTTGCACATATTCGCGTGCCAGGCATTTCCAGGTGGGG 6138 || || || || || || || || ||||| |||||||| || | ||| ||| | ||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCAT-TCGGG 174 Query 6139 AAAATGGTGGTGCGCTCG 6156 ||| ||||||||||||| Sbjct 175 AAAGCGGTGGTGCGCTCG 192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108988134010778