Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq22 84.2 3e-11 >seq22 Length=338851 Score = 84.2 bits (92), Expect = 3e-11 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 ||||||||| || | ||||| || || || || || || || | ||| | || ||| Sbjct 331530 AATGCAAATCTTCGTCAAGACCCTCACCGGAAAGACCATCACCTTGGAGGTCGAGAGCTC 331471 Query 124597 ATGATACAATTTCTAATTTAAA-ACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 |||||| || | | || ||| || || ||||| || ||||| || || ||||| Sbjct 331470 -TGATACCATCGAGAGCGTGAAGACA-AAGATCCAAGACAAGGAAGGAATCCCCCCTGAC 331413 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 |||||| | ||||| || || ||||| ||| | |||||| | || || | || || Sbjct 331412 CAACAACGCCTTATCTTCGCCGGAAAGCAACTCGAGGATGGACGCACCCTCTCCGACTAC 331353 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGT 124747 ||||||||||| || || || ||||| ||||| Sbjct 331352 AATATTCAAAAGGAGTCCACCTTGCACTTGGT 331321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754797931721600