Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_002702.1 Length=32621 Score E Sequences producing significant alignments: (Bits) Value seq61051 104 5e-18 >seq61051 Length=235 Score = 104 bits (114), Expect = 5e-18 Identities = 172/241 (71%), Gaps = 8/241 (3%) Strand=Plus/Plus Query 5297 TCCAACTGGTCAGAAAACACTAtttttttGTTGTCTAATCTGGTGGCGAACGATCCGTAC 5356 |||| |||||||||||| || || |||| |||| | ||||||| ||||| ||||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTT--GTGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 5357 AGTGCGTTTGATAAAAGTTTGGCAATGCTTCGCATGGTTTGGTTCTTTTCCCTGTCTGCC 5416 || ||||| || | | ||||| ||| |||| |||||||| ||| | | || || Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGT--TTTGCGCGATCGGCG 116 Query 5417 TTTTCCTTTGCTGCGATGTTCAGCTGCACGTACTCTTTGGCCAAGCATTTCCATTCCGGG 5476 ||||| || |||||||| ||||||||||| || || | ||| ||||| |||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATT-CGGG 174 Query 5477 AAAATGGTAGTGCGTTCATCAGGCACAAGCCTCACTCGCCAGCCTCGGTTGTGGAGCGTG 5536 ||| ||| ||||| || | ||||| || ||| ||||| || || |||| || ||| Sbjct 175 AAAGCGGTGGTGCGCTC-GCGGGCACCAGGTGCACGCGCCAACCGAGG-TGTGCAGGGTG 232 Query 5537 A 5537 | Sbjct 233 A 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104179316762202