Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_002794.1 Length=195859 Score E Sequences producing significant alignments: (Bits) Value seq4906 114 2e-20 >seq4906 Length=4638 Score = 114 bits (126), Expect = 2e-20 Identities = 254/371 (68%), Gaps = 39/371 (11%) Strand=Plus/Minus Query 175024 TGCGCCAGCTTGCCCCACAGCATGAACACGAGGTGCTCGCGCCGTTCCGAGAGCTGGCGG 175083 ||||| || |||||||||||||||||||||||||||| | || | | ||| || || Sbjct 3942 TGCGCGTGCGCGCCCCACAGCATGAACACGAGGTGCTCGTGGCGCGCGGCGAGTTGCTGG 3883 Query 175084 ATCAGCGCGTC-GCACAGGGTCTGCCAGCCCAGGTGTTCGTGCGAGCCCGGTCGTC-CGC 175141 ||||||| ||| | ||| | || |||||| | | |||| | | ||| || ||| Sbjct 3882 ATCAGCGTGTCGGTGCAGCG-CTCCCAGCCGCGCTTCGCGTG-GCTCGCGGCGCTCGCGC 3825 Query 175142 GGAGGACGGTGAAGACCGAGTTGAGCAGCAGGAC-CCCTTGCTCGCACCAGCCGTCGAGG 175200 | |||||| | |||| ||| |||||||| || |||| || ||| |||| ||||||| Sbjct 3824 GCTCGACGGTCAGCACCGTGTTCAGCAGCAGCACGCCCTGGCGCGC-CCAGGCGTCGAGA 3766 Query 175201 CAGCCG-GAGCCGGGCATCTCGAAGCCG-GGCACGGAGCGCACCAGTTCCTTGAAGATGT 175258 |||||| | | | ||| || | |||| ||| || ||| | ||||||||||||| Sbjct 3765 CAGCCGTGCGTC-GGCGCCTGAATGCCGAGGCTCGCCGCG----ATCTCCTTGAAGATGT 3711 Query 175259 TGCGGAGCGACGGCGGGATCCGGTCGC-------CCGTCGTCGCGAACGCCAGTCCGTTG 175311 |||| ||||| ||||| ||| ||| || | || ||||||||| |||| Sbjct 3710 TGCGCAGCGAAGGCGG----CGGGCGCACCGAGGGCGGCACCGAGAACGCCAGGCCGTGC 3655 Query 175312 GC--GCTGC-------------CGTCGTGATAGGGATCCTGCCCGATGATGACCACGTGC 175356 || || || || |||| || || ||||| |||| ||| || || | | Sbjct 3654 GCCTGCGGCGTGCCTCGATCTTCGCCGTGGTACGGGTCCTGGCCGAGGATCACGACCTTC 3595 Query 175357 ACGTCTTCGGG 175367 ||||| ||||| Sbjct 3594 ACGTCGTCGGG 3584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626074958453880