Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq3751 93.3 8e-15 seq6067 86.0 1e-12 >seq3751 Length=6646 Score = 93.3 bits (102), Expect = 8e-15 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||||| ||||| || |||||| |||||| ||||||||| |||||||||||||||| Sbjct 1776 TGGTGGGGCGTGAGTGACTCGAACACTCGACCTACGGATTAAGAGTCCGCTGCTCTACCA 1717 Query 418 ACTGAGCTAACGACCC 433 |||||||||||| ||| Sbjct 1716 ACTGAGCTAACGCCCC 1701 >seq6067 Length=3302 Score = 86.0 bits (94), Expect = 1e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 359 GGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGA 418 ||| || ||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1856 GGTAGGCCGTACTGGATTCGAACCAGTGACCAACGGATTAAAAGTCCGCTGCTCTACCAG 1915 Query 419 CTGAGCTAACGACCC 433 ||||||||||| ||| Sbjct 1916 CTGAGCTAACGGCCC 1930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100620664104180