Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1429 102 8e-17 >seq1429 Length=23345 Score = 102 bits (112), Expect = 8e-17 Identities = 193/280 (69%), Gaps = 7/280 (3%) Strand=Plus/Minus Query 11927 TCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC 11986 || || |||||||| || || || ||||| |||||||| || || || ||||| | | Sbjct 7476 TCGGAGTGAATATTCTCAATGGCGATTTGGAATCCATAAAAGCAGCGAGCCTCAGGGATC 7417 Query 11987 TGTACATCCA-CATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGC 12045 ||||| || ||| ||| | || | |||||||| ||||| |||||||| | || Sbjct 7416 TGTACTTCTTGCATGAAACGAGTT-GCAAGGTTCTCATTCACAATTCCATCACTGGCAGC 7358 Query 12046 AAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTC----TTTAGTTAATTTATCCC 12101 ||| || || || | | || |||| ||| || || || |||| ||| |||| Sbjct 7357 AAAGAAAGCAAGGACACTGGAGATGAAGTGTTTCTCATCCGCATTGAGTTTCTTT-TCCC 7299 Query 12102 AATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATT 12161 | || |||| ||| | ||| |||| || || ||||||| || || ||| | | || Sbjct 7298 AGTCGACTAAGTCTGATTGTAAGTCTATCTCCTCCGCGGTCCAGAAGCTGGCCTCAGCTT 7239 Query 12162 GTTTATACATTTTCCAGATATCATGATACTTAATAGGGAA 12201 | || ||||||||||| | ||||| | ||| || ||||| Sbjct 7238 GCTTGTACATTTTCCATACTTCATGGTGCTTGATGGGGAA 7199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468116673903280