Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_003444.1 Length=37074 Score E Sequences producing significant alignments: (Bits) Value seq2388 86.0 1e-12 >seq2388 Length=11216 Score = 86.0 bits (94), Expect = 1e-12 Identities = 175/256 (68%), Gaps = 8/256 (3%) Strand=Plus/Plus Query 19339 ATAAGTCCATACGCGAAGAGGAAAGGTTGAAAAACTTGTGATACCTTCCAGTGCCAGATT 19398 |||||||||||||||||| || | || ||||| |||| || ||||| || | || Sbjct 6023 ATAAGTCCATACGCGAAGTGGCAGCGTGCTGAAACTCGTGAAGCCCTCCAGCGCGAAGTT 6082 Query 19399 CCATAATTTCCAGCCATTAAATTTTGAGATGCCAGCAACGCGCTCTGCGCGTACATATTC 19458 ||| | |||||| || ||| || || |||| || | |||| | |||| |||||||| Sbjct 6083 CCACAGTTTCCACCCGGAAAACTTCGACCTGCCGGCGAGGCGCGGTTCGCGCACATATTC 6142 Query 19459 AACGACATCTGTCTGACCACCCACCCAGCTCAGTATGCCTTTCATGAAAAGATTGCGC-- 19516 ||||| | ||| | || |||||| | | ||||||||||| | |||| Sbjct 6143 GACGACGGCGGTCCGGTACCCGACCCAGGCGAACAGACCTTTCATGAAGCG---GCGCGT 6199 Query 19517 -TCAGGCAACAGTTTAATGTTC-TCCACAACCTCACGAGACATGAGTCGAAAATCTCCGA 19574 || || | | |||| | || | ||||| |||||||| | || | || || || || | Sbjct 6200 TTCGGGAAGCTGTTTGA-GTGCGTCCACGACCTCACGTGTAATCAAGCGGAAGTCGCCCA 6258 Query 19575 CATTTTCCTCGATCTT 19590 | |||||| ||||| Sbjct 6259 CGTTTTCCGGAATCTT 6274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118417124746184