Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30]
69,687 sequences; 205,175,886 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq612 113 6e-20
seq1429 100 4e-16
>seq612
Length=73199
Score = 113 bits (124), Expect = 6e-20
Identities = 327/503 (65%), Gaps = 3/503 (1%)
Strand=Plus/Plus
Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757
|||| ||| || || || || || || ||||| | | ||| |||| || || ||
Sbjct 23705 GCAATAGACGCAAGGTTGCACACAGCAACCTCGTCTGGCGCGGTGTATTCGATTATCTCT 23764
Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817
||||| || || ||||| |||||| || | ||||| ||||| ||| |||| |
Sbjct 23765 GTGCAGAGGTTGCTACAAGAGATGGTCCCAAGGTTTTGCTGATTCGACTTCCTGTTGGCC 23824
Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877
| ||||| || || || ||||| |||| || || || |||| || | || || |
Sbjct 23825 GAGTCCTTGTACAGCATGTACGGATTACCGGTCTCTATTTGAGCCTCGAGGATGGCAAAC 23884
Query 71878 CAGACGACTCGAGCCTTTATTATATTCTTGT---ATCTCTTTTCTCTTTCGTATTGTGTA 71934
|| | || | ||||| ||| | ||| || | | || | ||| || | ||
Sbjct 23885 CACAAATCTTGGGCCTTCATTGTCTTCCTGGCCAAGCCCTCAGTTTGTTCATACTTGGTG 23944
Query 71935 TATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACAC 71994
|| || ||||| | |||||||| | | | | ||| | ||| || || ||
Sbjct 23945 TACAACTCCTCGAATTGTTCTCCCCAGACCTCAGCAAGTCCTTTAGCTTCGTTGGGGCAG 24004
Query 71995 ATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 72054
| | ||||| || |||| || | || || ||||| |||||||| || | ||||||
Sbjct 24005 AAGAGGGACCAGTCACCATTTTCCTCCACACGCTTCATGAAGAGATCTGGGACCCAAAGT 24064
Query 72055 GCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 72114
|| |||| |||| | | || |||||| || || || ||||| ||||||||||
Sbjct 24065 GCGTAGAATAAGTCTCGCGCGCGATTCTCCTCCTTGCCGGTGTTCTTGCGAAGATCGAGG 24124
Query 72115 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTG 72174
|| | ||||| |||| |||||| ||||||| ||| | || | ||||| || |||
Sbjct 24125 AAAGATATAATGTCAGCATGCCAGGGTTCCAGGTAAACTGCAAAGGCTCCCTTTCGCTTG 24184
Query 72175 TTTCCTCCCTGATCTATGTATCT 72197
||||| || || | |||||
Sbjct 24185 CCGCCTCCTTGGTCAACATATCT 24207
>seq1429
Length=23345
Score = 100 bits (110), Expect = 4e-16
Identities = 132/181 (73%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 42175 AGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT 42234
||||| | ||| || ||||| || ||||| || | ||||||||| || || | | ||
Sbjct 7518 AGAAATGTGGATACCCTCTACCGCTGCAAATGCTACAAGTCTCTCAGCA-AAGCTTCCCT 7576
Query 42235 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 42294
| ||||||||| | | |||||||| |||||||| || |||||||| || || || ||
Sbjct 7577 CT--TGTATCCACCTCAGTGCCCAATCAGCCTTCTTCTTCACACAAGGGATTGTCTCAAT 7634
Query 42295 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACT 42354
||||| || || || |||||| | | ||| | ||||| ||||||||||||||
Sbjct 7635 AGCATTGAACAGTCTGTCTTTTTCTTGTGGGTTTTTGATGTATGTGTCGATCAAAAGACT 7694
Query 42355 A 42355
|
Sbjct 7695 A 7695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670554579032120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |