Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30]
69,687 sequences; 205,175,886 total letters
Query= NC_005261.2
Length=137821
Score E
Sequences producing significant alignments: (Bits) Value
seq4906 109 5e-19
>seq4906
Length=4638
Score = 109 bits (120), Expect = 5e-19
Identities = 255/374 (68%), Gaps = 33/374 (9%)
Strand=Plus/Minus
Query 99423 CTGGGCGTGCGCGCCCCAGAGCATGAACACCA-----TCGGGCCGCCCTGCGCGCTCAGG 99477
||| |||||||||||||| ||||||||||| | ||| | ||| | ||| | | |
Sbjct 3943 CTGCGCGTGCGCGCCCCACAGCATGAACACGAGGTGCTCGTGGCGCGCGGCGAGTT---G 3887
Query 99478 CGGGCCAGCACCGCGT-GCACCAGCCGCCCCCAGCCCAGGCTGGCGTGCGAGCCCGGCGC 99536
| || | || || || | |||| || ||||||| | | ||||| | | ||||||
Sbjct 3886 CTGG--ATCAGCGTGTCGGTGCAGC-GCTCCCAGCCGCGCTTCGCGTG-GCTCGCGGCGC 3831
Query 99537 CC-CGCTCCGCACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCT 99595
| ||| | ||||| ||| ||||| |||||||||||||| ||||||||||||| |
Sbjct 3830 TCGCGCGCTCGACGGTCAGCACCGTGTTCAGCAGCAGCACGCCCTGGCGCGCCCAGGCGT 3771
Query 99596 CCAGGCAGCCGTGCTGCGGCCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGA 99655
| || ||||||||| |||| | | | || || | || | | || | |||
Sbjct 3770 CGAGACAGCCGTGCGTCGGCGCCTGAATGCC---GAGGCTCGCCGCGATCTCCTTGAAGA 3714
Query 99656 TGTTCTGGAGGCTGGGCGG-GATCGGAACG-CCGCGGTTCACGCTGAAGGCCAGGCCGTG 99713
|||| | || ||||| | || | || |||| ||| ||| |||||||||||
Sbjct 3713 TGTTGCGCAGCGAAGGCGGCGGGCGCACCGAGGGCGG--CACCGAGAACGCCAGGCCGTG 3656
Query 99714 GGCCTGC-CCGTG-----------GCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTT 99761
|||||| |||| || |||||| ||||||||||| ||||| ||||||||
Sbjct 3655 CGCCTGCGGCGTGCCTCGATCTTCGCCGTGGTACGGGTCCTGGCCGAGGATCACGACCTT 3596
Query 99762 GACGTCCTCGGGCG 99775
||||| |||||||
Sbjct 3595 CACGTCGTCGGGCG 3582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440515138218120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |