Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq4906 109 5e-19 >seq4906 Length=4638 Score = 109 bits (120), Expect = 5e-19 Identities = 255/374 (68%), Gaps = 33/374 (9%) Strand=Plus/Minus Query 99423 CTGGGCGTGCGCGCCCCAGAGCATGAACACCA-----TCGGGCCGCCCTGCGCGCTCAGG 99477 ||| |||||||||||||| ||||||||||| | ||| | ||| | ||| | | | Sbjct 3943 CTGCGCGTGCGCGCCCCACAGCATGAACACGAGGTGCTCGTGGCGCGCGGCGAGTT---G 3887 Query 99478 CGGGCCAGCACCGCGT-GCACCAGCCGCCCCCAGCCCAGGCTGGCGTGCGAGCCCGGCGC 99536 | || | || || || | |||| || ||||||| | | ||||| | | |||||| Sbjct 3886 CTGG--ATCAGCGTGTCGGTGCAGC-GCTCCCAGCCGCGCTTCGCGTG-GCTCGCGGCGC 3831 Query 99537 CC-CGCTCCGCACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCT 99595 | ||| | ||||| ||| ||||| |||||||||||||| ||||||||||||| | Sbjct 3830 TCGCGCGCTCGACGGTCAGCACCGTGTTCAGCAGCAGCACGCCCTGGCGCGCCCAGGCGT 3771 Query 99596 CCAGGCAGCCGTGCTGCGGCCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGA 99655 | || ||||||||| |||| | | | || || | || | | || | ||| Sbjct 3770 CGAGACAGCCGTGCGTCGGCGCCTGAATGCC---GAGGCTCGCCGCGATCTCCTTGAAGA 3714 Query 99656 TGTTCTGGAGGCTGGGCGG-GATCGGAACG-CCGCGGTTCACGCTGAAGGCCAGGCCGTG 99713 |||| | || ||||| | || | || |||| ||| ||| ||||||||||| Sbjct 3713 TGTTGCGCAGCGAAGGCGGCGGGCGCACCGAGGGCGG--CACCGAGAACGCCAGGCCGTG 3656 Query 99714 GGCCTGC-CCGTG-----------GCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTT 99761 |||||| |||| || |||||| ||||||||||| ||||| |||||||| Sbjct 3655 CGCCTGCGGCGTGCCTCGATCTTCGCCGTGGTACGGGTCCTGGCCGAGGATCACGACCTT 3596 Query 99762 GACGTCCTCGGGCG 99775 ||||| ||||||| Sbjct 3595 CACGTCGTCGGGCG 3582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440515138218120