Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq4462 260 6e-65 >seq4462 Length=5303 Score = 260 bits (288), Expect = 6e-65 Identities = 269/351 (77%), Gaps = 1/351 (0%) Strand=Plus/Minus Query 10116 CAACG-AAGCAACTTGGAGGGAATAATGGCAAGCGTAAACAAGGTAATTTTGGTTGGAAA 10174 ||||| || ||| |||| | | |||||| ||| |||||||| || | || || || Sbjct 5122 CAACGGAATCAAACAGGAGAAATTCATGGCATCCGTGAACAAGGTGATCCTCGTCGGCAA 5063 Query 10175 CTTAGGGGCCGATCCTGAAGTCCGTTACCTGCCGAGCGGCGACGCGGTTGCGAACATCCG 10234 | | || |||||||| ||||| || || ||||||||||||||||| || |||||||| || Sbjct 5062 CCTCGGCGCCGATCCGGAAGTGCGCTATCTGCCGAGCGGCGACGCCGTGGCGAACATTCG 5003 Query 10235 TCTCGCGACGACCGATCGATACAAGGACAAGGCGAGCGGCGACATCAAGGAGGCGACTGA 10294 ||||| |||||||| || ||||||||||||||| |||||| ||||||| ||| || Sbjct 5002 CCTCGCCACGACCGACCGCTACAAGGACAAGGCGTCCGGCGAGTTCAAGGAAATGACCGA 4943 Query 10295 ATGGCACCGCGTCTCGTTCTTCGGTCGGCTGGCTGAGATCGTCGACGAGCACCTGCGCAA 10354 |||||||||||| ||||||||||| || ||||| ||||||||| ||| ||||| || Sbjct 4942 ATGGCACCGCGTGTCGTTCTTCGGGCGCCTGGCCGAGATCGTCTCGGAGTACCTGAAGAA 4883 Query 10355 GGGCGCATCTGTCTACATCGAGGGGCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGG 10414 ||| | || || || ||||| || |||||| ||||| || ||||| | || ||| Sbjct 4882 GGGTTCGTCGGTGTATATCGAAGGCCGCATCCGCACGCGCAAATGGCAAGCGCAGGACGG 4823 Query 10415 CCAGGATCGTTACACGACCGAGATCGTCGCTGACCGCATGCAGATGCTCGG 10465 | || || ||| |||| || |||||||| |||| ||||||||||| || Sbjct 4822 CACCGACCGCTACTCGACGGAAATCGTCGCCGACCAGATGCAGATGCTGGG 4772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204124087941501