Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_005263.2 Length=48177 Score E Sequences producing significant alignments: (Bits) Value seq4569 98.7 3e-16 >seq4569 Length=5133 Score = 98.7 bits (108), Expect = 3e-16 Identities = 159/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 13293 GTCCGACACCGACTGGCGCGTGCGCAGCCAGTTGTCGATGTACGGCATCGCGAGCTGCGT 13352 |||||| ||||||||||| ||||| |||||||| |||| ||||||| || | |||| Sbjct 1976 GTCCGATACCGACTGGCGTGTGCGAAGCCAGTTTTCGACGTACGGCTTCATCATCTGCAA 2035 Query 13353 CATGCTGATGCCGGCGAACGAATACGTCGGCTTGAGCATGTCGCCTACCGGCCGGGACAC 13412 || | ||| ||||||| ||| | ||| ||||| ||||| |||||| || ||||| Sbjct 2036 CAGCGAAAGGCCTGCGAACGCATAGGCCGGTTTGAGAATGTCCGGTACCGGTCGCGACAC 2095 Query 13413 GATCGTGTGCAGGCGCGTCGCATGCACTTCGCTGCCGATCATCCACCACGTCGACGGTTT 13472 | ||| ||||| ||| || | |||| || || | |||| ||| ||| Sbjct 2096 AACCGTCATGAGGCGGCTCGAGTGGATCTCGCGCCCCATGACAAACCAGCTCGTCGGCCG 2155 Query 13473 GTAGAAATCGTCCG--CGACCGGGTTGATCGAGTTGTAGTTGTTCGG 13517 |||||||| || | ||| ||| | | || ||||||| |||||| Sbjct 2156 GTAGAAAT--TCGGGTCGAGCGGATCGTCCGCGTTGTAGCGGTTCGG 2200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153917322825266