Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_006144.1 Length=34246 Score E Sequences producing significant alignments: (Bits) Value seq61051 210 5e-50 >seq61051 Length=235 Score = 210 bits (232), Expect = 5e-50 Identities = 195/240 (81%), Gaps = 8/240 (3%) Strand=Plus/Plus Query 6040 CCATTTGGTCAGAAAACACAATCTGTCGGTTGTCAAGCTTGGTTGCAAAAGACCCGTAGA 6099 |||| ||||||||||| ||||||| | | ||||||||||||| ||||| |||||||||| Sbjct 2 CCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAGA 59 Query 6100 GGGCGTTGGAGAGCAACTTGGCGATGGAGCGCTGGGTTTGGtttttttCCCGGTCGGCTT 6159 |||||||||| ||||||||||||||||||||| |||||||| |||| | || ||||| Sbjct 60 GGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGG--TTTTGCGCGATCGGCGC 117 Query 6160 TTTCCTTGGCTGCGATGTTGAGCTGGACGTACTCCCTGGCCACGCACTTCCAGCCGGGAA 6219 |||||||| |||||||| ||||| ||||| || | || |||||| ||| |||| | Sbjct 118 GCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGG-A 175 Query 6220 AAACGGCCGTGCGCTCGTCCGGCACCAGCCTTACGCTCCATCCGCGGTTGTGCAGGGTGA 6279 || ||| ||||||||| | |||||||| |||| ||| ||| || |||||||||||| Sbjct 176 AAGCGGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCAACCGAGG-TGTGCAGGGTGA 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109375013589952