Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq4906 149 6e-31 >seq4906 Length=4638 Score = 149 bits (164), Expect = 6e-31 Identities = 277/400 (69%), Gaps = 25/400 (6%) Strand=Plus/Minus Query 94073 TTTTGAGCGTGGGCGCCCCAGAGCATGAACACCAG---CTTGGGGCGGGTCTCGCAGAGC 94129 || || ||||| |||||||| ||||||||||| || || | |||| | || ||| Sbjct 3945 TTCTGCGCGTGCGCGCCCCACAGCATGAACACGAGGTGCTCGTGGCGCG---CGGCGAGT 3889 Query 94130 CGCTGGACGACGGCGCGCACGAGCCGCGC--CCAGCCGAGCGGGGCGTGGGAGCCGGGGA 94187 |||||| | ||| | | || |||| ||||||| || |||||| ||| | Sbjct 3888 TGCTGGATCA--GCGTGTCGGTGCAGCGCTCCCAGCCGCGCTTCGCGTGGCTCGCGGCGC 3831 Query 94188 CCCCGCGCCGCACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCT 94247 | ||||| ||||||||| |||||||||||||||||| || ||||||||||||| | Sbjct 3830 TCGCGCGCTCGACGGTCAGCACCGTGTTCAGCAGCAGCACGCCCTGGCGCGCCCAGGCGT 3771 Query 94248 CCAGGCAGCCGTGGGCGGGCGCGGGCAGCGTCGGGTACGTCGCCCGGACCGCCGCGAAGA 94307 | || |||||||| | ||||| | | | || | ||||| || | || ||||| Sbjct 3770 CGAGACAGCCGTGCGTCGGCGCCTG-AATGCCGAG--GCTCGCCGCGATCTCCTTGAAGA 3714 Query 94308 TGTTGGCCAGGCTCGGGGGGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCCCGTGGG 94367 ||||| ||| || || ||||| | || | || ||| ||||| ||||| | Sbjct 3713 TGTTGCGCAGCGAAGGCGGCGGGCGCACCGAGGGCGGCACCGAGAACGCCAGGCCGTGCG 3654 Query 94368 CCTG------GCC-CG-----GCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGA 94415 |||| ||| || |||||||||||||||||||||| ||| || ||||| | Sbjct 3653 CCTGCGGCGTGCCTCGATCTTCGCCGTGGTACGGGTCCTGGCCGAGGATCACGACCTTCA 3594 Query 94416 CGTCCTCGGGCGCCGTGAGGCGCGTCCAGGCGAACACGTC 94455 |||| ||||||| ||||||||| | | ||||||||| Sbjct 3593 CGTCGTCGGGCGAGGTGAGGCGCAGCGCGCGGAACACGTC 3554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458547416830920