Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_006548.1 Length=38439 Score E Sequences producing significant alignments: (Bits) Value seq9539 163 7e-36 >seq9539 Length=1484 Score = 163 bits (180), Expect = 7e-36 Identities = 249/350 (71%), Gaps = 10/350 (3%) Strand=Plus/Plus Query 26034 TCATCCCCTGGATAGGGGGAAAGCGCCGCCTCGCTGACCGCATCTTCCCGCTTTTCCCAC 26093 |||| || ||||||| || || || || || || ||| | | || | ||| |||| Sbjct 767 TCATTCCGCGGATAGGTGGCAA-CGGCGGCTTGCGGACGTGCTGATTCCACGTTTTCCAC 825 Query 26094 GCCACTCCTGCTATGTCGAGCCTTTCGCAGGTGG-GGCGGCACTGTTCTTCCTACGGCCG 26152 |||| |||| | ||||||| || || || | |||||||| ||||||| | | | || Sbjct 826 GCCATACCTGTTCTGTCGAGGTGTTTGCGGGGCGCGGCGGCACGGTTCTTCATGCTGTCG 885 Query 26153 GTGCCGGCGGATGTGGAAGTGCTCAACGACATCAACGGCGACCTGGTCAACCTGTACCGC 26212 || || || ||||| ||||| || ||||| | || || ||||| || ||||| ||| Sbjct 886 ---CCTGCCGAGGTGGAGGTGCTGAATGACATGAGCGATGAGCTGGTGAATCTGTATCGC 942 Query 26213 GTCGTTCAGCATCATCTGGAAGAGTTCGTCCGCCAGTTCAAATGGGCGCTCAGCTCTCGC 26272 || || ||||| || || || | |||||| | || || ||||||||| | | | || Sbjct 943 GTGGTGCAGCACCACCTCGAGGTGTTCGTGAGGCAATTTAAATGGGCGTTGA---CGAGC 999 Query 26273 CAGGTCTTCAAGTGGCTGCAGGAGACCCGGCCGGAAACGCTGACCGACATCCAGCGCGCC 26332 | | ||| | ||||||||||| || || || || ||||| || ||||||||||| || Sbjct 1000 CGG--CTTAAGATGGCTGCAGGACACGCGCCCCGAGACGCTCACGGACATCCAGCGTGCT 1057 Query 26333 GCGCGCTTTTACTACCTGCAGCAGAGCGCGTTCGGCGGCCGGGTCGATGG 26382 ||||| || ||||| ||||| |||| || || || || || || || || Sbjct 1058 GCGCGGTTCTACTATCTGCAACAGAACGGCTTTGGTGGTCGTGTTGAGGG 1107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122781510081494