Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq4462 107 8e-19 >seq4462 Length=5303 Score = 107 bits (118), Expect = 8e-19 Identities = 191/279 (68%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 11215 GTAGTGGTCCTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCTTCGATGTA 11274 |||| |||| ||||||||| | ||||| ||||| ||||| | || ||||||||| || Sbjct 4810 GTAGCGGTCGGTGCCGTCCTGCGCTTGCCATTTGCGCGTGCGGATGCGGCCTTCGATATA 4869 Query 11275 GACCTGGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCAAAGAGCAC 11334 ||| || ||||| |||||| | || |||| |||||||| || || |||| | Sbjct 4870 CACCGACGAACCCTTCTTCAGGTACTCCGAGACGATCTCGGCCAGGCGCCCGAAGAACGA 4929 Query 11335 GACCCGGTGCCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTTCCAGCTTTC 11394 || |||||||| ||||| |||| || ||||| | |||||| || ||| || Sbjct 4930 CACGCGGTGCCATTCGGTCATTTCCTTGAACTCGCCGGACGCCTTGTCCTTGTAGCGGTC 4989 Query 11395 GCTAGTGGCCAGACTGAGGGAGGTGACCGCCTTTCCGCCCGGGGTAGATCTTGCGTCTGG 11454 | | ||||| || | | | | || || | |||| ||| | | | | || || Sbjct 4990 GGTCGTGGCGAGGCGAATGTTCGCCACGGCGTCGCCGCTCGGCAGATAGCGCACTTCCGG 5049 Query 11455 ATCCTGGCCCAGATGGCCGACCAGGATTACCTTGTTCAC 11493 ||| ||| || | |||||| ||||| ||||||||||| Sbjct 5050 ATCGGCGCCGAGGTTGCCGACGAGGATCACCTTGTTCAC 5088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208322119479292