Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8719 196 8e-46 seq16 82.4 1e-11 >seq8719 Length=1734 Score = 196 bits (216), Expect = 8e-46 Identities = 207/269 (77%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||||| | |||||| || ||||||||||| |||||||||||||| ||| Sbjct 1045 GCCAAGCGCCATCGCAAAGTTCTTCGCGACAACATCCAAGGCATCACCAAGCCAGCCATC 986 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| ||||| || ||||| || |||||| |||| || || |||| || || | | Sbjct 985 CGTCGTCTTGCTCGCCGAGGTGGTGTGAAGCGTATCTCAGGTCTGATCTACGAGGAAACT 926 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATAC--CG 16610 |||| ||| ||||| | ||||| ||| ||| |||| |||||| | ||| |||| | Sbjct 925 CGTGGAGTTCTGAAGGTATTCCTTGAGAACGTGATCCGTGATGCCGT-CAC-ATACTGTG 868 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || | ||||| ||||| ||||||| ||||||| || ||||||| |||| Sbjct 867 AGCACGCCAAGAGAAAGACCGTCACAGCCATGGACGTCGTCTACGCTCTGAAACGCCAAG 808 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | |||| | || ||||| ||| | ||| Sbjct 807 GACGTACCCTCTACGGTTTCGGAGGATAA 779 >seq16 Length=362796 Score = 82.4 bits (90), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| | | | || |||||||||||||||| ||||||||||| ||||| Sbjct 4562 CGCAAAGCGTCACAGGAAAGTGCTCAGAGATAACATCCAAGGCATCACCAAGCCCGCTAT 4621 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCT 16529 || | ||||||| |||||||| || |||||| ||| Sbjct 4622 TCGCAGATTGGCTCGCCGTGGTGGTGTGAAGCGTATCT 4659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79011484688091