Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_006879.1 Length=34450 Score E Sequences producing significant alignments: (Bits) Value seq61051 248 2e-61 >seq61051 Length=235 Score = 248 bits (274), Expect = 2e-61 Identities = 204/241 (85%), Gaps = 8/241 (3%) Strand=Plus/Plus Query 5705 TCCATCTGATCAGAAAACACGATCTTTTTATTGTCAAGTTTGGTGGCGAAAGACCCGTAG 5764 |||||||| |||||||| || ||||||| ||||||| |||||||| || ||||||||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 5765 AGGGCGTTGGAAAGCAACTTGGCGATGGAGCGCAGGGTCTGATTTTTCTCCCGATCGGCC 5824 ||||||||||| |||||||||||||||||||||||||| || |||| | |||||||| Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTT--GCGCGATCGGCG 116 Query 5825 CTCTCCTTGGCGGCGATGTTGAGTTGCACGTACTCGCGGGCCACGCACCGCCACTCGGGG 5884 | ||||||||| |||||||| || |||||||| ||||| || ||||||||||| || ||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTC-GGG 174 Query 5885 AACACGGCGGTGCGCTCGTCGGGCAGGATGCGCACGCGCCAGCCGCGGTTGTGCAGGGTG 5944 || ||| |||||||||| |||||| | | |||||||||| ||| || ||||||||||| Sbjct 175 AAAGCGGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCAACCGAGG-TGTGCAGGGTG 232 Query 5945 A 5945 | Sbjct 233 A 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110027273376328