Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq146 87.8 2e-12 >seq146 Length=178297 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26770 TGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACG 26829 |||| | ||||| |||||| | |||||||| | ||||| | || | || | Sbjct 157907 TGCAGATTTTTGTGAAAACACTCACTGGAAAGACCATCACGTTGGAGGTCGAGAGCTCTG 157848 Query 26830 ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAAC 26889 ||||||||||| ||||| ||||||| ||||| || || || || || || |||| Sbjct 157847 ACACCATCGAGAGCGTCAAGACAAAGATTCAAGACAAGGAGGGAATTCCCCCTGACCAAC 157788 Query 26890 AAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACA 26949 | | ||||| | || || || |||||||| || | | | | |||||||||| || | Sbjct 157787 AGCGCCTCATCTTCGCTGGAAAGCAACTCGAGGACGGACGCACCCTCAGCGACTACAATA 157728 Query 26950 TTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||| || || || || |||| |||| || | ||| | || |||| Sbjct 157727 TTCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGCCTTCGTGGTGGAA 157680 Score = 82.4 bits (90), Expect = 7e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||||| ||||| ||||| ||||| ||||| || || ||||| || Sbjct 157206 CGACACCATCGAGTCCGTCAAGACCAAGATCCAGGACAAGGAAGGAATCCCCCCCGACCA 157147 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||| | | |||| | ||||| |||||||| |||| | | | || |||||| || Sbjct 157146 ACAACGTTTGATTTTTGCTGGCAAGCAACTCGAGGATGGACGCACCCTCTCCGACTACAA 157087 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| ||||| || || || |||| |||| || | ||| | || |||| Sbjct 157086 CATCCAAAAGGAGTCCACCCTCCACTTGGTGCTCCGCCTTCGTGGTGGAA 157037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478245443166640