Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30]
69,687 sequences; 205,175,886 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq146 87.8 2e-12
>seq146
Length=178297
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26770 TGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACG 26829
|||| | ||||| |||||| | |||||||| | ||||| | || | || |
Sbjct 157907 TGCAGATTTTTGTGAAAACACTCACTGGAAAGACCATCACGTTGGAGGTCGAGAGCTCTG 157848
Query 26830 ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAAC 26889
||||||||||| ||||| ||||||| ||||| || || || || || || ||||
Sbjct 157847 ACACCATCGAGAGCGTCAAGACAAAGATTCAAGACAAGGAGGGAATTCCCCCTGACCAAC 157788
Query 26890 AAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACA 26949
| | ||||| | || || || |||||||| || | | | | |||||||||| || |
Sbjct 157787 AGCGCCTCATCTTCGCTGGAAAGCAACTCGAGGACGGACGCACCCTCAGCGACTACAATA 157728
Query 26950 TTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
|||| || || || || |||| |||| || | ||| | || ||||
Sbjct 157727 TTCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGCCTTCGTGGTGGAA 157680
Score = 82.4 bits (90), Expect = 7e-11
Identities = 120/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
||||||||||||| ||||| ||||| ||||| ||||| || || ||||| ||
Sbjct 157206 CGACACCATCGAGTCCGTCAAGACCAAGATCCAGGACAAGGAAGGAATCCCCCCCGACCA 157147
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947
|||| | | |||| | ||||| |||||||| |||| | | | || |||||| ||
Sbjct 157146 ACAACGTTTGATTTTTGCTGGCAAGCAACTCGAGGATGGACGCACCCTCTCCGACTACAA 157087
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
||| ||||| || || || |||| |||| || | ||| | || ||||
Sbjct 157086 CATCCAAAAGGAGTCCACCCTCCACTTGGTGCTCCGCCTTCGTGGTGGAA 157037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478245443166640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |