Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30]
69,687 sequences; 205,175,886 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq146 93.3 4e-14
>seq146
Length=178297
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 23992 TGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACG 24051
|||| | ||||| |||||| | |||||||| | || || | || |||||| | |
Sbjct 157907 TGCAGATTTTTGTGAAAACACTCACTGGAAAGACCATCACGTTGGAGGTCGAGAGCTCTG 157848
Query 24052 ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAAC 24111
||||||||||| ||||| ||||||| ||||| || || || || || || ||||
Sbjct 157847 ACACCATCGAGAGCGTCAAGACAAAGATTCAAGACAAGGAGGGAATTCCCCCTGACCAAC 157788
Query 24112 AGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACA 24171
|| | || || | || || ||||||||||| || | | | | ||||||| || || |
Sbjct 157787 AGCGCCTCATCTTCGCTGGAAAGCAACTCGAGGACGGACGCACCCTCAGCGACTACAATA 157728
Query 24172 TTCAAAAAGAATCTACAATTCATTTAGTG 24200
|||| || || || || | || || |||
Sbjct 157727 TTCAGAAGGAGTCCACCCTCCACTTGGTG 157699
Score = 84.2 bits (92), Expect = 2e-11
Identities = 130/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074
|||||||| | || || | || |||||| | ||||||||||||| |||||
Sbjct 157241 ACTGGAAAGACCATCACTCTTGAGGTCGAGAGCTCCGACACCATCGAGTCCGTCAAGACC 157182
Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134
||||| ||||| ||||| || || ||||| ||||| | |||||| | ||||||
Sbjct 157181 AAGATCCAGGACAAGGAAGGAATCCCCCCCGACCAACAACGTTTGATTTTTGCTGGCAAG 157122
Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194
|||||||| |||| | | | || ||| || ||||| ||||| || || || | ||
Sbjct 157121 CAACTCGAGGATGGACGCACCCTCTCCGACTACAACATCCAAAAGGAGTCCACCCTCCAC 157062
Query 24195 TTAGTG 24200
|| |||
Sbjct 157061 TTGGTG 157056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429570850921485
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |