Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq146 93.3 4e-14 >seq146 Length=178297 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23992 TGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACG 24051 |||| | ||||| |||||| | |||||||| | || || | || |||||| | | Sbjct 157907 TGCAGATTTTTGTGAAAACACTCACTGGAAAGACCATCACGTTGGAGGTCGAGAGCTCTG 157848 Query 24052 ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAAC 24111 ||||||||||| ||||| ||||||| ||||| || || || || || || |||| Sbjct 157847 ACACCATCGAGAGCGTCAAGACAAAGATTCAAGACAAGGAGGGAATTCCCCCTGACCAAC 157788 Query 24112 AGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACA 24171 || | || || | || || ||||||||||| || | | | | ||||||| || || | Sbjct 157787 AGCGCCTCATCTTCGCTGGAAAGCAACTCGAGGACGGACGCACCCTCAGCGACTACAATA 157728 Query 24172 TTCAAAAAGAATCTACAATTCATTTAGTG 24200 |||| || || || || | || || ||| Sbjct 157727 TTCAGAAGGAGTCCACCCTCCACTTGGTG 157699 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 |||||||| | || || | || |||||| | ||||||||||||| ||||| Sbjct 157241 ACTGGAAAGACCATCACTCTTGAGGTCGAGAGCTCCGACACCATCGAGTCCGTCAAGACC 157182 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 ||||| ||||| ||||| || || ||||| ||||| | |||||| | |||||| Sbjct 157181 AAGATCCAGGACAAGGAAGGAATCCCCCCCGACCAACAACGTTTGATTTTTGCTGGCAAG 157122 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 |||||||| |||| | | | || ||| || ||||| ||||| || || || | || Sbjct 157121 CAACTCGAGGATGGACGCACCCTCTCCGACTACAACATCCAAAAGGAGTCCACCCTCCAC 157062 Query 24195 TTAGTG 24200 || ||| Sbjct 157061 TTGGTG 157056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429570850921485