Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq3555 179 1e-40 >seq3555 Length=7106 Score = 179 bits (198), Expect = 1e-40 Identities = 281/392 (72%), Gaps = 14/392 (4%) Strand=Plus/Plus Query 35509 CAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGGCGCCGATGACGTTGCAGCCGGGCGA 35568 ||| || ||| | |||||||| || || || |||||||| ||| | | |||||||| Sbjct 3510 CAGCGCCGGCCTCGACCTGCGCGCGTGCCTCGACGCGCCGATCACGCTCGAACCGGGCGA 3569 Query 35569 TGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGACCCGCAGCTGTGCG-CGG 35627 || ||| | || | ||| |||| ||||| |||||||||| | ||| ||| || Sbjct 3570 AACGAAGCTAGTGCCTACGGGCCTCGCCATCCACGTGGCCGACCC-CGGCTACGCGGCGC 3628 Query 35628 TGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTACTCGGCAA--CGGTAC 35685 ||||||||||||||||||| |||||||| ||||||||||| ||||| || ||| Sbjct 3629 TGATCCTGCCGCGCTCGGGCCTTGGCCACAAGCACGGCATCGTGCTCGGTAATCTGGT-- 3686 Query 35686 CGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCTGGAATCGCGGCCG 35745 |||||| ||||| |||| |||||||| | || |||| |||||||| ||||||| Sbjct 3687 CGGCCTGATCGACTCGGACTACCAGGGCGAGCTGATGATTTCGACCTGGAACCGCGGCCA 3746 Query 35746 CGAGGCCTTCACCATCGAGCCGGGCGACCGGATTGCGCAGCTGGTGATCCTGCCGGTCGT 35805 | ||||||| || | ||| || || | |||||||| |||||| |||||||||| Sbjct 3747 CACCACCTTCACGCTCAACCCGCTGGAGCGCCTCGCGCAGCTCGTGATCGTGCCGGTCGT 3806 Query 35806 GC--GCGTAGGCTTGCGAGTGGTGGAC-ACTTTCGTCGACAGCGCGCGCGGCGCGGGTGG 35862 || ||| || || | || ||| ||||| | | |||| ||| |||||||| || Sbjct 3807 GCAGGCGCAG--TTCAACATCGTCGACGACTTT-GAGGCAAGCGAGCGTGGCGCGGGCGG 3863 Query 35863 ATTCGGTCACACCGGCGTGCGCTGA--CTGGC 35892 ||||| ||| ||| || |||| ||||| Sbjct 3864 TTTCGGCAGCACGGGCAAGCACTGAGCCTGGC 3895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149012585019870