Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_008201.1 Length=34525 Score E Sequences producing significant alignments: (Bits) Value seq2320 174 3e-39 >seq2320 Length=11620 Score = 174 bits (192), Expect = 3e-39 Identities = 288/416 (69%), Gaps = 0/416 (0%) Strand=Plus/Plus Query 566 GCCAAAACCGCCGGTGTTATTTGGGATAATCCCCATCAGTTGTGGTGGCACACGGTGAGC 625 |||||| |||||||| || | || | |||||||| || || || || | || || || Sbjct 7421 GCCAAATCCGCCGGTATTGCTCGGCACGATCCCCATGAGCTGCGGGGGGATGCGATGCGC 7480 Query 626 AGCTAACACATCATCACGGCTCACGTTCTTGATATTAAAAAACTCATCTTTTGCCGACAC 685 || | || || || || | || ||||||||||| |||||||| ||||| |||| || Sbjct 7481 CGCGAGCAAGTCGTCGCGCGTGACATTCTTGATATTGAAAAACTCGTCTTTCGCCGTGAC 7540 Query 686 ATCAGCAATCGGAATAATCTGTATTCCATCTTTCTTGCCGTTTGGTGCGTGGACGAACAA 745 || | || ||||| | ||| || || |||||||||||||| || |||| | ||||| Sbjct 7541 CTCGGAAACGGGAATGAGCTGGATACCGTCTTTCTTGCCGTTCGGCGCGTACATGAACAG 7600 Query 746 GTTTTTAAAATTCCCCACCCCTTTTGACTGCTTGAGCTGCTGGCGAATATTTTCAACATC 805 |||| ||||| || ||| || | || | | || ||| || || || ||||| Sbjct 7601 GTTTCGGAAATTGCCTGGCCCCTTGCTGTTTTTCAACGCCTCGCGCATGTTGTCGACATC 7660 Query 806 TTCTTGTTTTTGTGACGCATCGCTCATATAAAACACAAAGCCGGCGTGAGCTCCATTTAA 865 ||| || | |||||| |||| || | | |||||| ||||| | ||||| Sbjct 7661 GGTTTGCGACTGCGCCGCATCCGTCATGTACAGGATAAAGCCCGCGTGCGAACCATTCTC 7720 Query 866 AAAATACTTACGGCGAAACAGAGTAGCACTCTCATTTAACCACGCAGATTGCAGGGCCGA 925 ||||| |||||||| || || || ||| || ||||| || | |||||||| Sbjct 7721 GTAATACCGCCGGCGAAATAGCGTCGCCGACTCGTTCAACCATGCCGCGTGCAGGGCGCC 7780 Query 926 AAGATATTGTGGCAAGCCGTAAATATCTTGATTAATATCAGGCTCAAGCAAGTGAT 981 ||||||| |||||||| || | || |||||||| || || || | |||||||| Sbjct 7781 GAGATATTCGGGCAAGCCATACACCTCCTGATTAATGTCCGGTTCCATCAAGTGAT 7836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110267074768378