Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_009016.1 Length=38197 Score E Sequences producing significant alignments: (Bits) Value seq9539 134 3e-27 >seq9539 Length=1484 Score = 134 bits (148), Expect = 3e-27 Identities = 176/243 (72%), Gaps = 7/243 (3%) Strand=Plus/Plus Query 21110 GGGGCCGCTGCCCTGTTTTTTATGAAGATGCCGACCAAGGTTGAAGTCATCAACGACGTG 21169 || || || || | ||| || ||| | ||| || |||| || || | || ||| || Sbjct 856 GGCGCGGCGGCACGGTTCTTCATGCTGTCGCCTGCCGAGGTGGAGGTGCTGAATGACATG 915 Query 21170 AACAGCGACCTGGTTAACCTGTACCGCGTGGTGCAGCATCACCTCGAGGAGTTCGTCCGC 21229 | | || ||||| || ||||| |||||||||||||| |||||||||| |||||| | Sbjct 916 AGCGATGAGCTGGTGAATCTGTATCGCGTGGTGCAGCACCACCTCGAGGTGTTCGTGAGG 975 Query 21230 CAGTTCAAATGGGCGCTTATCAGCCGCGAGATGTTCAAG-TGGCTGGACGATACGCCCGT 21288 || || ||||||||| | | ||||| | | ||| |||||| | || |||| | Sbjct 976 CAATTTAAATGGGCGTTGACGAGCCG------GCTTAAGATGGCTGCAGGACACGCGCCC 1029 Query 21289 CGAGACCCTGACCGATATTCAGCGTGCTGCCCGGTTCTATTACCTGCAGCAGATGGGCTT 21348 |||||| || || || || ||||||||||| |||||||| || ||||| |||| ||||| Sbjct 1030 CGAGACGCTCACGGACATCCAGCGTGCTGCGCGGTTCTACTATCTGCAACAGAACGGCTT 1089 Query 21349 CGG 21351 || Sbjct 1090 TGG 1092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122007750923146