Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq6776 140 8e-28 seq22 140 8e-28 seq146 122 2e-22 seq2782 118 2e-21 seq59190 107 5e-18 seq30454 100 7e-16 seq66879 91.5 3e-13 >seq6776 Length=2740 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || || || || | |||| || || ||||| || ||||| | | Sbjct 1439 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAG 1380 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || ||||||||||| ||||| || ||| Sbjct 1379 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 1320 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || ||||| || || || | ||||||| || || Sbjct 1319 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGCTCGGCTCCACC 1260 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||| ||||||||| |||||||| ||||| ||||| |||||||| Sbjct 1259 TCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 1213 >seq22 Length=338851 Score = 140 bits (154), Expect = 8e-28 Identities = 150/197 (76%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 ||||| || |||||||| || ||||||| ||| ||||||||||| || | || ||||| Sbjct 330925 GTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCGAGCTGCTTTCCG 330984 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 |||||||||| || ||||| | ||||||||||| || |||||||| || | ||| Sbjct 330985 GCGAAGATCAAGCGTTGTTGGTCAGGGGGGATTCCTTCCTTGTCCTGGATCTTGGTCTTC 331044 Query 288397 ACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || | || || | ||| |||| ||||||||||| ||||| ||||| || |||| Sbjct 331045 ACACTCTCGATGGTATCGGAGCTC---TCTACTTCGAGGGTGATGGTCTTGCCAGTCAAG 331101 Query 288454 GTCTTGACGAATATCTG 288470 ||||| ||||| ||||| Sbjct 331102 GTCTTCACGAAGATCTG 331118 Score = 131 bits (144), Expect = 4e-25 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| ||||| || | ||| || | || | ||| || ||||| ||||| ||||||| Sbjct 331302 TCCTCCGCGAAGGCGAAGCACCAAGTGCAAGGTGGACTCCTTTTGAATATTGTAGTCGGA 331361 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| |||||||| || || | ||| ||||| |||||||| || || ||||| | || Sbjct 331362 GAGGGTGCGTCCATCCTCGAGTTGCTTTCCGGCGAAGATAAGGCGTTGTTGGTCAGGGGG 331421 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 ||||||||| || || ||||| || | |||||| | || || | ||| |||| || Sbjct 331422 GATTCCTTCCTTGTCTTGGATCTTTGTCTTCACGCTCTCGATGGTATCAGAGCTC---TC 331478 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || | ||||| ||||| ||||| || ||||||||||| || |||||| Sbjct 331479 GACCTCCAAGGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCATT 331530 Score = 107 bits (118), Expect = 5e-18 Identities = 139/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| || || || | || || || |||||| Sbjct 331903 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAG 331962 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || || ||||| | ||||||||||| || || ||||| || | |||||| | Sbjct 331963 ATAAGGCGTTGTTGGTCAGGGGGGATTCCTTCCTTGTCTTGGATCTTTGTCTTCACGCTC 332022 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| |||| || || || | ||| || ||||| || || ||||||||| Sbjct 332023 TCGATGGTATCAGAGCTC---TCGACCTCCAACGTTATAGTCTTGCCAGTGAGAGTCTTG 332079 Query 288460 ACGAATATCTG 288470 ||||| ||||| Sbjct 332080 ACGAAGATCTG 332090 Score = 96.9 bits (106), Expect = 8e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | || || | || | ||| || || ||||| || |||||| Sbjct 331530 TCCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCT 331589 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | |||||||| || || | || ||||| || ||||||| ||||||||| || Sbjct 331590 CAAGGTGCGTCCATCCTCAAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCGGGGGG 331649 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 ||| || || || || ||||| || | |||||| | || || | ||| |||| || Sbjct 331650 GATGCCCTCCTTGTCTTGGATCTTGGTCTTCACGCTCTCGATGGTATCAGAGCTC---TC 331706 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCA 288472 || || | ||||| ||||| ||||||| ||||||||||| |||| || Sbjct 331707 GACCTCTAAAGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTACA 331756 >seq146 Length=178297 Score = 122 bits (134), Expect = 2e-22 Identities = 164/227 (72%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | || | ||| || || ||||| || ||||||| | Sbjct 156625 CCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 156684 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| || |||| ||| || || |||||||||| ||| ||||| | ||| Sbjct 156685 AGGGTGCGTCCATCCTCTAGTTGCTTGCCAGCGAAGATCAAACGTTGTTGGTCAGGGGGG 156744 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 |||||||| || |||||||| || | || || || || | ||| |||| ||| Sbjct 156745 ATTCCTTCCTTGTCCTGGATCTTGGTCTTGACAGACTCGATGGTATCGGAGCTC---TCT 156801 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTG 288470 || || || ||||| ||||| || || || ||||||||||| ||||| Sbjct 156802 ACCTCAAGAGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTG 156848 Score = 100 bits (110), Expect = 7e-16 Identities = 137/190 (72%), Gaps = 6/190 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||||| ||| |||||||| || || | ||| || || || || Sbjct 157075 TCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGTCCATCCTCGAGTTGCTTGCCAGCAAAA 157134 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||| ||||| ||||||||||| || |||||||| || | || ||| Sbjct 157135 ATCAAACGTTGTTGGTCGGGGGGGATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGGAC 157194 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || || ||||| ||||| || || || |||||| Sbjct 157195 TCGATGGTGTCGGAGCTC---TCGACCTCAAGAGTGATGGTCTTTCCAGTGAGGGTCTTG 157251 Query 288460 ACGAATATCT 288469 ||||| |||| Sbjct 157252 ACGAAGATCT 157261 Score = 93.3 bits (102), Expect = 1e-13 Identities = 137/193 (71%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || ||||| |||||| ||| ||||||||||| || | ||| ||||| |||||| Sbjct 157718 TCCTTCTGAATATTGTAGTCGCTGAGGGTGCGTCCGTCCTCGAGTTGCTTTCCAGCGAAG 157777 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || |||||||| | || ||||| || || || || || || | || ||| | Sbjct 157778 ATGAGGCGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCTTGAATCTTTGTCTTGACGCTC 157837 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || | |||||| ||||| || || || || || Sbjct 157838 TCGATGGTGTCAGAGCTC---TCGACCTCCAACGTGATGGTCTTTCCAGTGAGTGTTTTC 157894 Query 288460 ACGAATATCTGCA 288472 || || ||||||| Sbjct 157895 ACAAAAATCTGCA 157907 >seq2782 Length=10868 Score = 118 bits (130), Expect = 2e-21 Identities = 163/227 (72%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||||||| || | ||| || | |||| ||| || || ||||| |||||||| | Sbjct 9446 TCCACCGCGAAGGCGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGA 9505 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || ||||| || || | ||| ||||| |||||||||| ||| ||||| | || Sbjct 9506 GAGGGTACGTCCATCCTCGAGTTGCTTTCCAGCGAAGATCAAACGTTGTTGGTCAGGGGG 9565 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 ||| ||||| || |||||||| || | || ||| || || | || |||| || Sbjct 9566 GATGCCTTCCTTGTCCTGGATCTTTGTCTTGACGGACTCAATGGTGTCCGAGCTC---TC 9622 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCT 288469 || || | ||||||||||| || || || ||||||||||| |||| Sbjct 9623 CACCTCCAAGGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAAATCT 9669 Score = 100 bits (110), Expect = 7e-16 Identities = 159/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | ||| || | |||| ||| ||||| || || || || || | Sbjct 9143 TCCACCACGAAGGCGAAGCACCAAGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGA 9202 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || |||||||| |||| ||| ||||| || ||||| || || ||||| | || Sbjct 9203 AAGGGTACGTCCGTCCTCTAGTTGCTTTCCAGCAAAGATGAGGCGTTGTTGGTCAGGGGG 9262 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 ||||||||| || |||||||| || | || ||| || || | ||| |||| || Sbjct 9263 GATTCCTTCCTTGTCCTGGATCTTAGTCTTTACGGACTCGATGGTATCAGAGCTC---TC 9319 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCT 288469 || || | || || ||||| || || || ||||||||||| |||| Sbjct 9320 GACCTCCAAGGTAATTGTCTTACCAGTGAGGGTCTTGACGAAAATCT 9366 Score = 98.7 bits (108), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | || | ||| || || ||||| || ||||||| | Sbjct 8823 CCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 8882 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| || || | || || || || ||||||| ||| ||||| | ||| Sbjct 8883 AGGGTGCGTCCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGTTGTTGGTCAGGGGGG 8942 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 |||||||| || |||||||| |||| |||||| || || | || |||| || Sbjct 8943 ATTCCTTCCTTGTCCTGGATCTTCGTCTTCACGGACTCAATGGTGTCAGAGCTC---TCG 8999 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCA 288472 || || | || || || || || || || ||||||||||| |||| || Sbjct 9000 ACCTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTACA 9048 >seq59190 Length=243 Score = 107 bits (118), Expect = 5e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || ||||| || | ||| || |||||||| || ||||| | || || ||||| || Sbjct 243 AGCACGAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGAGTACGTCCATCC 184 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || ||||| |||||||| ||||||||||| |||||||| ||||| || Sbjct 183 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGTTGGTCGGGAGGGATTCCCTCTTTGTCT 124 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || | || || | || |||| || || || || || || || || ||| Sbjct 123 TGGATCTTGGTCTTGACACTCTCGATAGTGTCAGAGGACTCGACCTCAAGGGTAATTGTC 64 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||||||||| |||||||| Sbjct 63 TTACCCGTGAGGGTCTTGACGAAAATCTGCAT 32 >seq30454 Length=461 Score = 100 bits (110), Expect = 7e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | || || | |||| ||| || ||||| ||||| ||||||| Sbjct 13 TCCACCACGGAGGCGGAGCACCAAGTGAAGGGTGGACTCCTTTTGAATATTGTAGTCGGA 72 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| |||||||| || || | || || || || ||||||| ||| ||||| | || Sbjct 73 GAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATCAAACGTTGTTGGTCAGGGGG 132 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 |||||||| || ||||| || || | || || || |||| || |||| || Sbjct 133 AATTCCTTCCTTGTCCTGAATCTTGGTCTTTACTGACTCGATAGTGTCAGAGCTC---TC 189 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCA 288472 || || || || || ||||| || || || ||||||||||| |||| || Sbjct 190 AACCTCAAGGGTAATAGTCTTACCAGTGAGGGTCTTGACGAAGATCTACA 239 >seq66879 Length=210 Score = 91.5 bits (100), Expect = 3e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 ||||| || |||||||| || |||||| | ||||| || || || || || ||||| Sbjct 97 GTGCTCTCCTTTTGGATGTTGTAGTCGCTCAAAGTGCGACCATCCTCCAACTGCTTTCCA 156 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTT 288389 |||||||||| ||||||||| | |||||||||||||| ||||| ||||| Sbjct 157 GCGAAGATCAAACGCTGTTGGTCAGGGGGGATTCCTTCTTTGTCCTGAATTTT 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178601128242786