Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq4028 91.5 6e-14 >seq4028 Length=6092 Score = 91.5 bits (100), Expect = 6e-14 Identities = 124/168 (74%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 6574 CGCCCGGGCGCTTTGGGACGCGATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGT 6633 |||||| ||||| ||||| ||||||||||| ||||| || ||| ||||||||||| Sbjct 3163 CGCCCGCGCGCTGTGGGATGCGATCATGCGTTCGACCTACGACGTGGCCGAGCCGGGCGT 3104 Query 6634 GCTGTTCATCGACGCG-ATCAACCGCATGAACAACCT-CTGGTACTGCGAGACCATCGCC 6691 | |||||||| |||| || ||| |||||||| | | || ||| ||||| | Sbjct 3103 GGTGTTCATC-TCGCGCATGAACGAGGACAACAACCTGCGCGCGCT-CGAATCCATCCGC 3046 Query 6692 GCCACGAACCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGC 6739 || || ||||| ||||| ||||| || || || |||||||| |||| Sbjct 3045 GCGACCAACCCGTGCGGCGAGCAGCCTCTGCCCGCCTACGGTTGCTGC 2998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187444754785750