Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30]
69,687 sequences; 205,175,886 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq6776 111 2e-19
seq22 102 8e-17
seq59190 98.7 1e-15
seq146 98.7 1e-15
seq2782 96.9 3e-15
seq62579 87.8 2e-12
seq30454 86.0 6e-12
>seq6776
Length=2740
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||||| | ||||| || || | ||| || || || || |||||||| || | |
Sbjct 1439 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAG 1380
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||| | || || |||||||||||||| | || || ||||||||||| || ||
Sbjct 1379 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 1320
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCAC-CGGCGTCCAC 64395
|| || || || || || || || ||| ||| ||| | || || | |||| |||||
Sbjct 1319 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGCTCGGC-TCCAC 1261
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | | | ||||||||||||| || || ||||| || |||||
Sbjct 1260 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 1213
>seq22
Length=338851
Score = 102 bits (112), Expect = 8e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | |||||| | || ||||||||||| |||
Sbjct 331561 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGTCCATCCTCAAGCTGCTTTCCG 331620
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | ||||| |||||||| || || || || || ||||| || || |||
Sbjct 331621 GCAAAGATCAAACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTC 331680
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | |||||| | || || |||| ||| | |||||| |||||||| ||
Sbjct 331681 ACGCTCTCGATGGTATCAGAGCTCTCGACCTCTAAAGTGATGGTCTTTCCGGTCAAGGTC 331740
Query 64427 TTTACGAAAAT 64437
|| ||||||||
Sbjct 331741 TTGACGAAAAT 331751
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || || || || || |||||||| || | || |||||| | ||
Sbjct 331882 AGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCC 331941
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || | || || || || ||||| || || |||||||| || |||
Sbjct 331942 TCGAGCTGCTTGCCAGCGAAGATAAGGCGTTGTTGGTCAGGGGGGATTCCTTCCTTGTCT 332001
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || ||| ||| || ||| | |||||| | || || || | |||| |||
Sbjct 332002 TGGATCTTTGTCTTCACGCTCTCGATGGTATCAGAGCTCTCGACCTCCAACGTTATAGTC 332061
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTG 64440
||||| || | ||| || ||||| || ||
Sbjct 332062 TTGCCAGTGAGAGTCTTGACGAAGATCTG 332090
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || |||| || || || || ||||||||||| || | | ||| | | ||
Sbjct 332217 AGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTCCTTCCATCC 332276
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| || |||||||| || ||||||| || || ||||| || || ||||| || || ||
Sbjct 332277 TCGAGTTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCAGGGGGGATTCCCTCCTTGTCC 332336
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | || ||| | || || || | ||| | ||||
Sbjct 332337 TGGATCTTAGTCTTGACACTCTCGATAGTGTCAGAGCTCTCGACCTCCAAAGTAATGGTC 332396
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAAT 64437
|| || || | ||| || ||||||||
Sbjct 332397 TTTCCTGTGAGAGTCTTCACGAAAAT 332422
>seq59190
Length=243
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || || || ||||| |||||||| || | | || || | ||
Sbjct 243 AGCACGAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGAGTACGTCCATCC 184
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| || || | ||||| ||||| ||||||||||| ||||| ||||| |||
Sbjct 183 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGTTGGTCGGGAGGGATTCCCTCTTTGTCT 124
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | || ||| || || || || | || | |||
Sbjct 123 TGGATCTTGGTCTTGACACTCTCGATAGTGTCAGAGGACTCGACCTCAAGGGTAATTGTC 64
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || || | || || |||||||| |||||
Sbjct 63 TTACCCGTGAGGGTCTTGACGAAAATCTGCAT 32
>seq146
Length=178297
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || |||||||||||||| || | || |||||| | || || || ||||| |||
Sbjct 157392 GTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGTCCATCCTCGAGTTGCTTTCCG 157451
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||| || || ||||| || |||||||| || || ||||| || || ||||
Sbjct 157452 GCGAAGATGAGGCGTTGTTGGTCAGGGGGAATTCCCTCCTTGTCTTGAATCTTAGTCTTT 157511
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | || ||| | || ||||| | ||| | |||||||| || | ||
Sbjct 157512 ACGCTCTCAATGGTGTCAGAGCTCTCGACTTCGAGAGTAATAGTCTTGCCAGTGAGGGTC 157571
Query 64427 TTTACGAAAATTTG 64440
|| ||||| || ||
Sbjct 157572 TTAACGAAGATCTG 157585
>seq2782
Length=10868
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| | |||| || || ||||| |||||||||||||| | | ||| || ||||
Sbjct 9158 AAGCACCAAGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGAAAGGGTACGTCCGTC 9217
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| || ||||| || ||| | ||||| || || ||||| || || |||||||| || ||
Sbjct 9218 CTCTAGTTGCTTTCCAGCAAAGATGAGGCGTTGTTGGTCAGGGGGGATTCCTTCCTTGTC 9277
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || |||||| ||| | |||||| | || || || | || | ||
Sbjct 9278 CTGGATCTTAGTCTTTACGGACTCGATGGTATCAGAGCTCTCGACCTCCAAGGTAATTGT 9337
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAA 64448
||| || || | || || |||||||| | || ||||
Sbjct 9338 CTTACCAGTGAGGGTCTTGACGAAAATCTAAATATTAA 9375
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || || || || || ||||||||||| | || ||| || | ||
Sbjct 9779 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGTCCATCC 9838
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| || |||||||||||| | || || || || ||||| || ||||||||||| || ||
Sbjct 9839 TCTAGTTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGGGGAATTCCTTCCTTGTCC 9898
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || ||| | || || | ||||| || | || | ||||
Sbjct 9899 TGGATCTTGGTCTTCACGGACTCGATGGTGTCTGAGCTCTCCACCTCGAGGGTGATGGTC 9958
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | || || ||||| || |||||
Sbjct 9959 TTGCCAGTGAGTGTCTTCACGAAGATCTGCAT 9990
>seq62579
Length=228
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||||| | ||||| || || | ||| || || || || |||||||| || | |
Sbjct 77 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAG 136
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||| | || || |||||||||||||| | || || ||||||||||| || ||
Sbjct 137 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 196
Query 64337 ATTCCTTCTTTTTCTTGTATTTT 64359
|| || || || || || || ||
Sbjct 197 ATGCCCTCCTTGTCCTGGATCTT 219
>seq30454
Length=461
Score = 86.0 bits (94), Expect = 6e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || || || |||||||| ||||| || | || |||||| | ||
Sbjct 29 AGCACCAAGTGAAGGGTGGACTCCTTTTGAATATTGTAGTCGGAGAGGGTGCGTCCATCC 88
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || | || || ||||| || ||||||||||| || ||
Sbjct 89 TCGAGCTGCTTGCCAGCAAAGATCAAACGTTGTTGGTCAGGGGGAATTCCTTCCTTGTCC 148
Query 64352 TGTATTTTTTGCTTTAC 64368
|| || || ||||||
Sbjct 149 TGAATCTTGGTCTTTAC 165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499209565660280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |