Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_010342.1 Length=39245 Score E Sequences producing significant alignments: (Bits) Value seq9539 122 2e-23 >seq9539 Length=1484 Score = 122 bits (134), Expect = 2e-23 Identities = 176/249 (71%), Gaps = 11/249 (4%) Strand=Plus/Plus Query 21377 GGGCGGCGCGGCGCTGTTCTTCATGAAGCAACCCAGCAAAGTGGAGGTGATCAACGACAC 21436 ||||| ||||| | |||||||||| | || | | ||||||||| | || |||| Sbjct 855 GGGCGCGGCGGCACGGTTCTTCATGCTGTCGCCTGCCGAGGTGGAGGTGCTGAATGACAT 914 Query 21437 CAACAGCGACCTGGTCAACTTGTACCGGGTGGTGCAGCACCACCTGGAGGAGTTCGTGCG 21496 | | || ||||| || |||| || ||||||||||||||||| |||| ||||||| | Sbjct 915 GAGCGATGAGCTGGTGAATCTGTATCGCGTGGTGCAGCACCACCTCGAGGTGTTCGTGAG 974 Query 21497 CCAGTTCAAGTGGGCGCT---GGTCTCGCGTGAGATGTTCGCGTGGGAGAAGCTCAAGCA 21553 || || || |||||| | | | || | ||| ||| | || || || Sbjct 975 GCAATTTAAATGGGCGTTGACGAGCCGGCTTAAGA--------TGGCTGCAGGACACGCG 1026 Query 21554 CACCGACACGCTAACGGATATCCAGCGGGCCGCGCGGTTCTACTACCTGCAGCAGCAGGG 21613 | |||| ||||| ||||| |||||||| || |||||||||||||| ||||| ||| | || Sbjct 1027 CCCCGAGACGCTCACGGACATCCAGCGTGCTGCGCGGTTCTACTATCTGCAACAGAACGG 1086 Query 21614 GTTTGGCGG 21622 ||||| || Sbjct 1087 CTTTGGTGG 1095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125358575708058