Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30]
69,687 sequences; 205,175,886 total letters
Query= NC_010342.1
Length=39245
Score E
Sequences producing significant alignments: (Bits) Value
seq9539 122 2e-23
>seq9539
Length=1484
Score = 122 bits (134), Expect = 2e-23
Identities = 176/249 (71%), Gaps = 11/249 (4%)
Strand=Plus/Plus
Query 21377 GGGCGGCGCGGCGCTGTTCTTCATGAAGCAACCCAGCAAAGTGGAGGTGATCAACGACAC 21436
||||| ||||| | |||||||||| | || | | ||||||||| | || ||||
Sbjct 855 GGGCGCGGCGGCACGGTTCTTCATGCTGTCGCCTGCCGAGGTGGAGGTGCTGAATGACAT 914
Query 21437 CAACAGCGACCTGGTCAACTTGTACCGGGTGGTGCAGCACCACCTGGAGGAGTTCGTGCG 21496
| | || ||||| || |||| || ||||||||||||||||| |||| ||||||| |
Sbjct 915 GAGCGATGAGCTGGTGAATCTGTATCGCGTGGTGCAGCACCACCTCGAGGTGTTCGTGAG 974
Query 21497 CCAGTTCAAGTGGGCGCT---GGTCTCGCGTGAGATGTTCGCGTGGGAGAAGCTCAAGCA 21553
|| || || |||||| | | | || | ||| ||| | || || ||
Sbjct 975 GCAATTTAAATGGGCGTTGACGAGCCGGCTTAAGA--------TGGCTGCAGGACACGCG 1026
Query 21554 CACCGACACGCTAACGGATATCCAGCGGGCCGCGCGGTTCTACTACCTGCAGCAGCAGGG 21613
| |||| ||||| ||||| |||||||| || |||||||||||||| ||||| ||| | ||
Sbjct 1027 CCCCGAGACGCTCACGGACATCCAGCGTGCTGCGCGGTTCTACTATCTGCAACAGAACGG 1086
Query 21614 GTTTGGCGG 21622
||||| ||
Sbjct 1087 CTTTGGTGG 1095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125358575708058
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |