Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_010956.1 Length=35083 Score E Sequences producing significant alignments: (Bits) Value seq61051 228 2e-55 >seq61051 Length=235 Score = 228 bits (252), Expect = 2e-55 Identities = 200/242 (83%), Gaps = 8/242 (3%) Strand=Plus/Plus Query 6011 TCCATCTGGTCAGAAAAGACTAtttttttATTGTCAAGCTTGGTGGCGAAGGAGCCATAG 6070 |||||||||||||||||||| || |||| |||||||||||||||| || || || ||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 6071 AGGGCGTTGGATAGAAGCTTGGCGATGGATCTCATGGTCTGATTTTTGTCACGGTCGGCG 6130 ||||||||||| || | |||||||||||| | || ||| || |||| | || |||||| Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTT--GCGCGATCGGCG 116 Query 6131 CGCTCCTTGGCCGCGATGTTTAGCTGGACATACTCGCGCGCGACGCACTTCCATTCGGGG 6190 |||||||||||||||||| ||||||| || || |||||||| |||||| ||||||||| Sbjct 117 CGCTCCTTGGCCGCGATG-TTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGA 175 Query 6191 AAGACGGTGGTGCGCTCGTCGGGCACGATCCTGACGCGCCAGCCGCGGTTATGCAGGGTG 6250 ||| |||||||||||||| ||||||| | |||||||| ||| || | ||||||||| Sbjct 176 AAG-CGGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCAACCGAGG-TGTGCAGGGTG 232 Query 6251 AC 6252 || Sbjct 233 AC 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112051197125230