Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq5777 251 3e-62 >seq5777 Length=3561 Score = 251 bits (278), Expect = 3e-62 Identities = 497/729 (68%), Gaps = 25/729 (3%) Strand=Plus/Plus Query 65917 CCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGG 65976 ||||||| ||| | | || ||| ||| |||||| | || || | ||| | ||||||| Sbjct 837 CCACCGGTTCGCTCGGCCTCGACATCGCACTCGGCGTGGGCGGTTTGCCGCGTGGCCGGG 896 Query 65977 TAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGG 66036 | || |||||||||||||| || || || || ||| | ||| | || || | | | | Sbjct 897 TGGTCGAGATCTACGGTCCGGAATCGTCGGGCAAGACCACGCTCACGCTGCAGGTGATCG 956 Query 66037 CC--AATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGA 66094 || ||||| ||||| ||| |||| || || | ||||||||| ||||| | ||||| Sbjct 957 CCGAAATGC--AGAAGCTCGGCGGCACGGCGGCGTTCATCGACGCGGAACACGCGCTCGA 1014 Query 66095 CCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGA 66154 | | |||||||| |||||| ||| | || | | || | | |||||| || Sbjct 1015 CGTGCAATACGCCGCCAAGCTCGGCGTGAACGTGCCCGAACTGCTCATCTCGCAGCCGGA 1074 Query 66155 CACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCAT 66214 ||| ||||||||||| || || ||| ||| || || || ||| | | ||| Sbjct 1075 CACGGGCGAGCAGGCGCTCGAAATCACCGACGCGCTGGTGCGCTCGGGCTCGATCGACAT 1134 Query 66215 CATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGG 66274 ||||| | ||||| || ||||| || |||||| ||| || ||||||| || || || Sbjct 1135 GATCGTGATCGACTCGGTCGCGGCGCTCGTGCCGAAGGCCGAAATCGAAGGTGAAATGGG 1194 Query 66275 GGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGG 66334 ||||||| || ||||| || ||||||||||| ||||| |||||||||| ||||| Sbjct 1195 CGACTCGCTGCCGGGTCTGCAGGCGCGCCTGATGTCGCAGGCGCTGCGCAAGCTCACCGG 1254 Query 66335 CACGATTGCCAGCACCAA---CACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGAT 66391 |||||| | || || || | | | | | | || ||| | ||| |||||| Sbjct 1255 CACGATCAAGAAGACGAACTGCATGGTGA---TCTTCATCAACCAGATCCGCATGAAGAT 1311 Query 66392 CGGCAACGTGGGCTACGGC---CCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTT 66448 ||| |||| | |||| ||| || |||||||| || || || || || || Sbjct 1312 CGG---CGTGATGTTCGGCAATCCG---GAAACCACCACGGGCGGCAACGCGCTCAAGTT 1365 Query 66449 CTACGCCTCGGTGCGTATGGATGTCCGCAGGATCG---CCACCGAGAAGGAAGGCGATGA 66505 |||| | ||||||||| |||| | ||| | |||| | | | ||||| | ||| || Sbjct 1366 CTACTCGTCGGTGCGTCTGGACATTCGCCGCATCGGTTCGATCAAGAAGAA---CGACGA 1422 Query 66506 GGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCG 66565 | |||||| | ||||| |||||||| || ||||||||| | |||| ||| ||| Sbjct 1423 AGTGATCGGCAGCGAAACGCGTGTGAAGGTCGTGAAGAACAAGGTTTCGCCGCCGTTCCG 1482 Query 66566 CCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCTGAACTCCTCGA 66625 | | || | ||| ||| |||||||||||||||| || || ||| ||| || |||| Sbjct 1483 CGAAGCCGTGTTCGACATTCTCTACGGCGAGGGCATCTCGCGTCAGGGCGAAATCGTCGA 1542 Query 66626 CATGGCCGT 66634 | | | ||| Sbjct 1543 CCTCGGCGT 1551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242264467388804