Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_011202.1 Length=34794 Score E Sequences producing significant alignments: (Bits) Value seq61051 141 2e-29 >seq61051 Length=235 Score = 141 bits (156), Expect = 2e-29 Identities = 143/183 (78%), Gaps = 5/183 (3%) Strand=Plus/Plus Query 6076 TCCATTTGGTCAGAAAACACAAtttttttATTGTCAAGTTTGGTGGCAAATGATCCATAC 6135 ||||| ||||||||||| ||||| |||| ||||||| ||||||||||| || || || Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 6136 AGGGCGTTGGATAAAAGTTTGGCAATGGATCGCATGGTTTGGTTCTTTTCCTTGTCCGCG 6195 ||||||||||| | | ||||| ||||| |||| |||||||| ||| | || ||| Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGT--TTTGCGCGATCGGCG 116 Query 6196 CGCTCTTTGGCGGCGATGTTGAGTTGGACATACTCGCGTGCCAGGCACTTCCATTCGGGG 6255 ||||| ||||| |||||||| || || || || ||||| || | |||| ||||||||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGA 175 Query 6256 AAG 6258 ||| Sbjct 176 AAG 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111127162427864