Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_011203.1 Length=35343 Score E Sequences producing significant alignments: (Bits) Value seq61051 178 3e-40 >seq61051 Length=235 Score = 178 bits (196), Expect = 3e-40 Identities = 152/183 (83%), Gaps = 5/183 (3%) Strand=Plus/Plus Query 6060 TCCATCTGGTCAGAAAACACAATCTTCTTGTTGTCCAGCTTGGTGGCAAATGATCCATAG 6119 ||||||||||||||||| |||||||| |||| ||| |||||||||||||| || || ||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTT-TTGT-GTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 6120 AGGGCATTGGATAGAAGCTTGGCGATGGAGCGCATGGTTTGGTTCTTTTCCTTGTCCGCG 6179 ||||| ||||| || | ||||||||||||||||| |||||||| ||| | || ||| Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGT--TTTGCGCGATCGGCG 116 Query 6180 CGCTCCTTGGCGGTGATGTTAAGCTGGACGTACTCGCGCGCCACACATTTCCATTCAGGA 6239 ||||||||||| | |||||| ||||| ||||| |||||||| || || |||||| ||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGA 175 Query 6240 AAG 6242 ||| Sbjct 176 AAG 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112882508617670